dirmult: Estimation in Dirichlet-Multinomial distribution.

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Estimate parameters in Dirichlet-Multinomial and compute profile log-likelihoods.

Author
Torben Tvedebrink <tvede@math.aau.dk>
Date of publication
2013-04-24 09:43:59
Maintainer
Torben Tvedebrink <tvede@math.aau.dk>
License
GPL (>= 2)
Version
0.1.3-4

View on CRAN

Man pages

adapGridProf
Profile log-likelihood of Dirichlet-multinomial model
dirmult
Parameter estimation in Dirichlet-multinomial distribution
dirmult.summary
Summary table of parameter estimates from dirmult
equalTheta
Test whether theta is equal for several tables
estProfLogLik
Profile log-likelihood of Dirichlet-multinomial model
gridProf
Profile log-likelihood of Dirichlet-multinomial model
nullTest
Simulation based test for null-hypothesis, H0:theta=0
rdirichlet
Simulate from Dirichlet distribution
simPop
Simulate data from Dirichlet-multinomial distribution
us
Allele counts for six US subpopulations.
weirMoM
Method of moment estimator of theta

Files in this package

dirmult
dirmult/MD5
dirmult/inst
dirmult/inst/CITATION
dirmult/data
dirmult/data/us.RData
dirmult/dirmult.pdf
dirmult/NAMESPACE
dirmult/R
dirmult/R/dirmult.R
dirmult/man
dirmult/man/simPop.Rd
dirmult/man/nullTest.Rd
dirmult/man/us.Rd
dirmult/man/dirmult.Rd
dirmult/man/estProfLogLik.Rd
dirmult/man/gridProf.Rd
dirmult/man/rdirichlet.Rd
dirmult/man/dirmult.summary.Rd
dirmult/man/adapGridProf.Rd
dirmult/man/equalTheta.Rd
dirmult/man/weirMoM.Rd
dirmult/DESCRIPTION