dissUtils: Utilities for making pairwise comparisons of multivariate data

This package has extensible C++ code for computing dissimilarities between vectors. It also has a number of C++ functions for assembling collections of dissimilarities. In particular, it lets you find a matrix of dissimilarities between the rows of two input matrices. There are also functions for finding the nearest neighbors of each row of a matrix, either within the matrix itself or within another matrix.

AuthorBenjamin N. Taft
Date of publication2014-06-02 14:50:54
MaintainerBenjamin N. Taft <ben.taft@landmarkacoustics.com>
LicenseGPL (>= 2) | file LICENSE
Version1.0

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Files

dissUtils
dissUtils/inst
dissUtils/inst/Perl
dissUtils/inst/Perl/make_options.pl
dissUtils/inst/Perl/make_implementation_template.pl
dissUtils/inst/images
dissUtils/inst/images/all_scatter.png
dissUtils/inst/images/all_trends.pdf
dissUtils/inst/C
dissUtils/inst/C/test.cpp
dissUtils/tests
dissUtils/tests/diss_test.R
dissUtils/src
dissUtils/src/factory.cpp
dissUtils/src/Makevars
dissUtils/src/neighbors.cpp
dissUtils/src/two_matrix_neighbors.cpp
dissUtils/src/options.h
dissUtils/src/two_matrix_differences.cpp
dissUtils/src/base.h
dissUtils/src/differences.h
dissUtils/src/neighbors.h
dissUtils/src/neighbor_set.h
dissUtils/src/neighbor_finder.h
dissUtils/src/generic_factory.h
dissUtils/src/row_maker.h
dissUtils/src/implementations
dissUtils/src/implementations/Pearson.h
dissUtils/src/implementations/BrayCurtis.h
dissUtils/src/implementations/Manhattan.h
dissUtils/src/implementations/Chebyshev.h
dissUtils/src/implementations/Hellinger.h
dissUtils/src/implementations/Minkowski.h
dissUtils/src/implementations/Equality.h
dissUtils/src/implementations/Covariance.h
dissUtils/src/implementations/Mahalanobis.h
dissUtils/src/implementations/Procrustes.h
dissUtils/src/implementations/Jaccard.h
dissUtils/src/implementations/Canberra.h
dissUtils/src/implementations/Euclidean.h
dissUtils/src/differences.cpp
dissUtils/NAMESPACE
dissUtils/demo
dissUtils/demo/dissUtils.R
dissUtils/demo/00Index
dissUtils/R
dissUtils/R/neighbor_density.R dissUtils/R/inverse_frequency.R dissUtils/R/neighbor_identify.R dissUtils/R/unit_hypersphere_volume.R dissUtils/R/knownmethods.R dissUtils/R/make_diss_names.R dissUtils/R/diss_index.R dissUtils/R/neighbors.R dissUtils/R/diss.R dissUtils/R/dissUtils-internal.R dissUtils/R/densest.R dissUtils/R/groupwise_density.R
dissUtils/README.md
dissUtils/MD5
dissUtils/DESCRIPTION
dissUtils/man
dissUtils/man/neighbor.density.Rd dissUtils/man/diss.index.Rd dissUtils/man/unit.hypersphere.volume.Rd dissUtils/man/dissUtils-package.Rd dissUtils/man/diss.Rd dissUtils/man/neighbor.identify.Rd dissUtils/man/groupwise.density.Rd dissUtils/man/neighbors.Rd
dissUtils/LICENSE

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