cvg: cvg Coverage
In divo: Tools for Analysis of Diversity and Similarity in Biological Systems
cvg R Documentation
cvg Coverage
Description
Calculates the sample coverage estimate using the Good-Turing formula. The sample coverage is an estimate of the probability of pulling a new species in the next draw, given a set of past observations For more details on CVG see Good I.J. (1953).
Usage
cvg(x)
Arguments
x
a vector containing input population
Author(s)
Christoph Sadee, Maciej Pietrzak, Michal Seweryn, Cankun Wang, Grzegorz Rempala
Maintainer: Maciej Pietrzak pietrzak.20@osu.edu
References
Good I.J. The population frequencies of species and the estimation of population parameters. (1953) Biometrika 40:237-64
Rempala G.A., Seweryn M. Methods for diversity and overlap analysis in T-cell receptor populations. (2013) J Math Biol 67:1339-68
Examples
data(TCR.Data)
result <- cvg(x[,1])
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| cvg | R Documentation |
cvg Coverage
Description
Calculates the sample coverage estimate using the Good-Turing formula. The sample coverage is an estimate of the probability of pulling a new species in the next draw, given a set of past observations For more details on CVG see Good I.J. (1953).
Usage
cvg(x)Arguments
x |
a vector containing input population |
Author(s)
Christoph Sadee, Maciej Pietrzak, Michal Seweryn, Cankun Wang, Grzegorz Rempala
Maintainer: Maciej Pietrzak pietrzak.20@osu.edu
References
Good I.J. The population frequencies of species and the estimation of population parameters. (1953) Biometrika 40:237-64
Rempala G.A., Seweryn M. Methods for diversity and overlap analysis in T-cell receptor populations. (2013) J Math Biol 67:1339-68
Examples
data(TCR.Data)
result <- cvg(x[,1])R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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