structure_probs: Plot Posterior Structure Probabilities

In easybgm: Extracting and Visualizing Bayesian Graphical Models

Plot Posterior Structure Probabilities

Description

Plots the posterior structure probabilities of all visited structures, sorted from the most to the least probable.

Usage

plot_structure_probabilities(output, as_BF = FALSE, ...)

Arguments

output	Output object from the easybgm function. Supports also objects from the bgm function of the bgms package.
as_BF	If TRUE plots the y-axis as Bayes factors instead of posterior structure probability. Default is FALSE.
...	Additional arguments passed onto ggplot2

Value

Returns a plot

Examples

library(easybgm)
library(bgms)

data <- na.omit(Wenchuan)
fit <- easybgm(data, type = "ordinal", save = TRUE, edge_selection = TRUE,
                iter = 1000  # for demonstration only (> 5e4 recommended)
                )

plot_structure_probabilities(fit)

easybgm documentation built on Oct. 17, 2024, 9:08 a.m.