ecospace: Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
Version 1.1.3

Implements stochastic simulations of community assembly (ecological diversification) using customizable ecospace frameworks (functional trait spaces). Provides a wrapper to calculate common ecological disparity and functional ecology statistical dynamics as a function of species richness. Functions are written so they will work in a parallel-computing environment.

AuthorPhil Novack-Gottshall [aut, cre]
Date of publication2017-02-20 08:11:18
MaintainerPhil Novack-Gottshall <pnovack-gottshall@ben.edu>
LicenseCC0
Version1.1.3
URL https://github.com/pnovack-gottshall/ecospace http://www.ben.edu/faculty/pnovack-gottshall/index.html
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("ecospace")

Getting started

Package overview
ecospace: Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks"

Popular man pages

create_ecospace: Create Ecospace Framework.
ecospace-package: ecospace: Simulating Community Assembly and Ecological...
neutral: Use Neutral Rule to Simulate Ecological Diversification of a...
partitioning: Use Partitioning Rule to Simulate Ecological Diversification...
prep_data: Internal Ecospace Functions.
sample2: Internal Ecospace Functions.
unique2: Internal Ecospace Functions.
See all...

All man pages Function index File listing

Man pages

calc_metrics: Calculate Ecological Disparity (Functional Diversity)...
create_ecospace: Create Ecospace Framework.
ecospace-package: ecospace: Simulating Community Assembly and Ecological...
expansion: Use Expansion Rule to Simulate Ecological Diversification of...
KWTraits: Species-by-Trait Matrix for Late Ordovician Marine Fossils.
neutral: Use Neutral Rule to Simulate Ecological Diversification of a...
partitioning: Use Partitioning Rule to Simulate Ecological Diversification...
prep_data: Internal Ecospace Functions.
rbind_listdf: Combine Large Lists of Data Frames.
redundancy: Use Redundancy Rule to Simulate Ecological Diversification of...
sample2: Internal Ecospace Functions.
unique2: Internal Ecospace Functions.

Functions

KWTraits Man page
calc_metrics Man page Source code
create_ecospace Man page Source code
ecospace Man page
ecospace-package Man page
expansion Man page Source code
neutral Man page Source code
partitioning Man page Source code
prep_data Man page Source code
rbind_listdf Man page Source code
redundancy Man page Source code
sample2 Man page Source code
unique2 Man page Source code

Files

inst
inst/NEWS.Rd
inst/doc
inst/doc/ecospace.R
inst/doc/ecospace.Rmd
inst/doc/ecospace.html
NAMESPACE
data
data/KWTraits.rda
R
R/calc_metrics.R
R/expansion.R
R/KWTraits.R
R/redundancy.R
R/neutral.R
R/partitioning.R
R/sample2.R
R/unique2.R
R/prep_data.R
R/create_ecospace.R
R/ecospace.R
R/rbind_listdf.R
vignettes
vignettes/ecospace.Rmd
MD5
build
build/vignette.rds
DESCRIPTION
man
man/expansion.Rd
man/partitioning.Rd
man/neutral.Rd
man/calc_metrics.Rd
man/sample2.Rd
man/rbind_listdf.Rd
man/KWTraits.Rd
man/prep_data.Rd
man/redundancy.Rd
man/unique2.Rd
man/create_ecospace.Rd
man/ecospace-package.Rd
ecospace documentation built on May 20, 2017, 3:19 a.m.

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