eemR: Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data

Provides various tools to calculate EEM fluorescence metrics and preprocess EEM for PARAFAC analysis.

AuthorPhilippe Massicotte [aut, cre]
Date of publication2016-08-29 14:16:11
MaintainerPhilippe Massicotte <pm@bios.au.dk>
LicenseGPL (>= 2)
Version0.1.4
https://github.com/PMassicotte/eemR

View on CRAN

Functions

absorbance Man page
eem Man page
eem_bind Man page
eem_biological_index Man page
eem_coble_peaks Man page
eem_cut Man page
eem_export_matlab Man page
eem_extract Man page
eem_extract_blank Man page
eem_fluorescence_index Man page
eem_humification_index Man page
eem_inner_filter_effect Man page
eem_names Man page
eem_names<- Man page
eem_raman_normalisation Man page
eem_read Man page
eem_remove_blank Man page
eem_remove_scattering Man page
eem_set_wavelengths Man page
plot.eemlist Man page
print.eemlist Man page
summary.eem Man page
summary.eemlist Man page

Files

eemR
eemR/inst
eemR/inst/extdata
eemR/inst/extdata/cary
eemR/inst/extdata/cary/scans_day_2
eemR/inst/extdata/cary/scans_day_2/blank.csv
eemR/inst/extdata/cary/scans_day_2/s1.csv
eemR/inst/extdata/cary/scans_day_1
eemR/inst/extdata/cary/scans_day_1/nano.csv
eemR/inst/extdata/cary/scans_day_1/sample1.csv
eemR/inst/extdata/cary/scans_day_1/sample3.csv
eemR/inst/extdata/cary/scans_day_1/sample2.csv
eemR/inst/extdata/shimadzu
eemR/inst/extdata/shimadzu/shimadzu.TXT
eemR/inst/extdata/aqualog
eemR/inst/extdata/aqualog/sample4.dat
eemR/inst/doc
eemR/inst/doc/eemR_intro.R
eemR/inst/doc/eemR_intro.html
eemR/inst/doc/parafac.html
eemR/inst/doc/eemR_intro.Rmd
eemR/inst/doc/introduction.R
eemR/inst/doc/parafac.R
eemR/inst/doc/introduction.html
eemR/inst/doc/parafac.Rmd
eemR/inst/doc/introduction.Rmd
eemR/tests
eemR/tests/testthat.R
eemR/tests/testthat
eemR/tests/testthat/test-metrics.R
eemR/tests/testthat/test-blank-correction.R
eemR/NAMESPACE
eemR/NEWS.md
eemR/data
eemR/data/absorbance.RData
eemR/R
eemR/R/eem_correction.R eemR/R/eem_metrics.R eemR/R/eem_utils.R eemR/R/eem_export.R eemR/R/eem_read.R eemR/R/absorbance.R
eemR/vignettes
eemR/vignettes/blank.rda
eemR/vignettes/ife.rda
eemR/vignettes/biblio.bib
eemR/vignettes/introduction.Rmd
eemR/README.md
eemR/MD5
eemR/build
eemR/build/vignette.rds
eemR/DESCRIPTION
eemR/man
eemR/man/eem_biological_index.Rd eemR/man/eem_names-set.Rd eemR/man/eem_remove_scattering.Rd eemR/man/eem_coble_peaks.Rd eemR/man/eem_inner_filter_effect.Rd eemR/man/summary.eem.Rd eemR/man/eem_remove_blank.Rd eemR/man/eem_extract.Rd eemR/man/eem.Rd eemR/man/eem_raman_normalisation.Rd eemR/man/print.eemlist.Rd eemR/man/eem_names.Rd eemR/man/eem_fluorescence_index.Rd eemR/man/eem_humification_index.Rd eemR/man/plot.eemlist.Rd eemR/man/eem_cut.Rd eemR/man/summary.eemlist.Rd eemR/man/eem_bind.Rd eemR/man/eem_read.Rd eemR/man/eem_export_matlab.Rd eemR/man/eem_extract_blank.Rd eemR/man/absorbance.Rd eemR/man/eem_set_wavelengths.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.