emon: Tools for Environmental and Ecological Survey Design
Version 1.3.2

Statistical tools for environmental and ecological surveys. Simulation-based power and precision analysis; detection probabilities from different survey designs; visual fast count estimation.

AuthorJon Barry and David Maxwell
Date of publication2017-03-09 14:50:09
MaintainerJon Barry <jon.barry@cefas.co.uk>
LicenseGPL-3
Version1.3.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("emon")

Getting started

Package overview

Popular man pages

detect: Probability of circular patch detection
expected.nb: Expected value of Visual Fast Count Estimator assuming...
fS.detect: Used in the function detect
GVFCMOM: Function to calculate the method of moments visual fast count...
mannkendall: Mann-kendall test for trend
mannkendall.stat: Mann-Kendall statistic.
n.min: Minimising function used in 'precision'.
See all...

All man pages Function index File listing

Man pages

addnoise: Creates random errors for use in power.trend.
detect: Probability of circular patch detection
detect.prop: Probability of detecting a feature that covers a proportion...
emon-package: Tools for environmental and ecological survey design and...
expected.nb: Expected value of Visual Fast Count Estimator assuming...
expected.pois: Expected value of Visual Fast Count Estimator assuming...
fS.detect: Used in the function detect
fT.detect: Used in function detect
generate.trend: Generates a set of mean values.
GVFC: Calculates the raw Visual Fast Count (VFC) estimator of the...
GVFCMOM: Function to calculate the method of moments visual fast count...
is.wholenumber: To check whether an argument is an integer
mannkendall: Mann-kendall test for trend
mannkendall.stat: Mann-Kendall statistic.
mom.min.nb: Minimising function for VFC MOM estimator assuming Negative...
mom.min.pois: Minimising function for VFC MOM estimator assuming Poisson...
n.min: Minimising function used in 'precision'.
permute.BACI: Does non-parametric randomisation test for the interaction...
permute.groups: Does randomisation test for the difference in means of two...
power.BACI: Calculates power for a Before and After Control Impact (BACI)...
power.groups: Power for comparing mean of two groups
power.trend: Calculates power by simulation to detect a specified trend.
precision: Sample size for given precision or precision for given sample...
size2.samevar: Calculates negative binomial size to preserve constant...
svariog: Calculates empirical semi-variogram.

Functions

GVFC Man page Source code
GVFCMOM Man page Source code
addnoise Man page Source code
detect Man page Source code
detect.prop Man page Source code
emon Man page
emon-package Man page
expected.nb Man page Source code
expected.pois Man page Source code
fS.detect Man page Source code
fT.detect Man page Source code
generate.trend Man page Source code
is.wholenumber Man page Source code Source code Source code Source code Source code
mannkendall Man page Source code
mannkendall.stat Man page Source code
mom.min.nb Man page Source code
mom.min.pois Man page Source code
n.min Man page Source code
permute.BACI Man page Source code
permute.groups Man page Source code
power.BACI Man page Source code
power.groups Man page Source code
power.trend Man page Source code
precision Man page Source code
size2.samevar Man page Source code
svariog Man page Source code

Files

NAMESPACE
R
R/baci.r
R/gvfc.r
R/trends.r
R/precision.R
R/variogram.r
R/detect.r
R/twogroups.r
MD5
DESCRIPTION
man
man/size2.samevar.Rd
man/GVFCMOM.Rd
man/fS.detect.Rd
man/mom.min.pois.Rd
man/expected.pois.Rd
man/detect.Rd
man/permute.BACI.Rd
man/power.trend.Rd
man/mannkendall.Rd
man/is.wholenumber.Rd
man/svariog.Rd
man/expected.nb.Rd
man/n.min.Rd
man/detect.prop.Rd
man/permute.groups.Rd
man/power.BACI.Rd
man/emon-package.Rd
man/mom.min.nb.Rd
man/GVFC.Rd
man/generate.trend.Rd
man/addnoise.Rd
man/fT.detect.Rd
man/mannkendall.stat.Rd
man/power.groups.Rd
man/precision.Rd
emon documentation built on May 19, 2017, 11:44 p.m.

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