enrichvs: Enrichment assessment of virtual screening approaches

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These programs are used for calculating enrichment factors, drawing enrichment curves to evaluate virtual screening approaches.

Author
Hiroaki YABUUCHI
Date of publication
2011-06-29 10:03:53
Maintainer
Hiroaki YABUUCHI <yabu.pharm@gmail.com>
License
BSD
Version
0.0.5

View on CRAN

Man pages

auac
Function to culculate the Area Under the Accumulation Curve...
auc
Function to calculate the Area Under the ROC Curve (AUC)
bedroc
Function to culculate the Boltzmann-Enhanced Discrimination...
dud_egfr
Scores and labels for EGFR ligands/docoys from DUD dataset
enrichment_factor
Function to calculate the enrichment factor (EF)
enrichvs-package
Enrichment assessment of virtual screening approaches
matplot_enrichment_curve
Function to plot multiple enrichment curves for virtual...
plot_enrichment_curve
Function to plot a enrichment curve for virtual screening
plot_enrichment_curve_xlog
Function to plot a enrichment curve with a logarithmic scale...
rie
Function to culculate the Robust Initial Enhancement (RIE)

Files in this package

enrichvs
enrichvs/NAMESPACE
enrichvs/R
enrichvs/R/rie.R
enrichvs/R/matplot_enrichment_curve.R
enrichvs/R/auac.R
enrichvs/R/auc.R
enrichvs/R/plot_enrichment_curve_xlog.R
enrichvs/R/plot_enrichment_curve.R
enrichvs/R/bedroc.R
enrichvs/R/enrichment_factor.R
enrichvs/DESCRIPTION
enrichvs/man
enrichvs/man/dud_egfr.Rd
enrichvs/man/enrichvs-package.Rd
enrichvs/man/matplot_enrichment_curve.Rd
enrichvs/man/plot_enrichment_curve.Rd
enrichvs/man/plot_enrichment_curve_xlog.Rd
enrichvs/man/enrichment_factor.Rd
enrichvs/man/auc.Rd
enrichvs/man/bedroc.Rd
enrichvs/man/auac.Rd
enrichvs/man/rie.Rd
enrichvs/data
enrichvs/data/dud_egfr.rda