API for epiphy
Analysis of Plant Disease Epidemics
| Global functions | |
|---|---|
| BetaBinomial | Man page |
| a2a | Man page |
| a2a.list | Man page |
| a2a.numeric | Man page |
| agg_index | Man page Source code |
| aphids | Man page |
| arthropods | Man page |
| as.character.count | Source code |
| as.character.incidence | Source code |
| as.character.mapping | Source code |
| as.character.severity | Source code |
| as.data.frame.intensity | Man page Source code |
| as.long.data.frame | Source code |
| as.long.data.frame.matrix | Source code |
| as.matrix.transport | Source code |
| as_matrix_transport | Source code |
| c.mapping | Source code |
| calpha.test | Man page Source code |
| calpha.test.fisher | Man page Source code |
| check_betabinom | Source code |
| chisq.test | Man page Source code |
| chisq.test.default | Man page Source code |
| chisq.test.fisher | Man page Source code |
| chisq.test2 | Source code |
| citrus_ctv | Man page |
| cloglog | Man page Source code |
| clump | Man page Source code |
| clump.intensity | Man page Source code |
| clust_LMX | Source code |
| clust_P | Source code |
| codling_moths | Man page |
| coef.smle | Man page Source code |
| coef.summary.smle | Source code |
| costTotCPP | Source code |
| costTotiCPP | Source code |
| count | Man page Source code |
| count_data | Man page Source code |
| dbetabinom | Man page Source code |
| dim.intensity | Source code |
| dogwood_anthracnose | Man page |
| droplevels.list | Source code |
| epiphy | Man page |
| estimate_param | Source code |
| estimate_param_ | Source code |
| fisher | Source code |
| fisher.count | Source code |
| fisher.default | Source code |
| fisher.incidence | Source code |
| fit_two_distr | Man page Source code |
| fit_two_distr.count | Man page Source code |
| fit_two_distr.default | Man page Source code |
| fit_two_distr.incidence | Man page Source code |
| fmt_init | Source code |
| get_fmt_obs | Source code |
| get_param_name_from_body | Source code |
| get_std_named_df | Source code |
| hop_viruses | Man page |
| incidence | Man page Source code |
| incidence_data | Man page Source code |
| ind2sub | Man page |
| indAndSub | Man page |
| init_intensity | Source code |
| intensity | Man page |
| is.completeArray | Source code |
| is.count | Man page Source code |
| is.incidence | Man page Source code |
| is.intensity | Man page Source code |
| is.severity | Man page Source code |
| is.wholenumber | Source code |
| link | Man page |
| ll_betabinom | Source code |
| ll_binom | Source code |
| ll_nbinom | Source code |
| ll_pois | Source code |
| lloyd | Source code |
| lloyd.count | Source code |
| lloyd.default | Source code |
| llrtest | Source code |
| logLik.smle | Man page Source code |
| logit | Man page Source code |
| map_data | Source code |
| mapcomp | Man page Source code |
| mapcomp.count | Man page Source code |
| mapcomp.data.frame | Man page Source code |
| mapcomp.incidence | Man page Source code |
| mapcomp.matrix | Man page Source code |
| mapped_var | Man page Source code |
| mapped_var<- | Man page |
| mapping | Man page Source code |
| mapping_ | Man page Source code |
| mesh_intersect | Source code |
| mme_betabinom | Source code |
| mme_binom | Source code |
| mme_nbinom | Source code |
| mme_pois | Source code |
| morisita | Source code |
| morisita.count | Source code |
| morisita.default | Source code |
| morisita.incidence | Source code |
| offspring_survival | Man page |
| onion_bacterial_blight | Man page |
| p_hscaled | Source code |
| pbetabinom | Man page Source code |
| plot.fit_two_distr | Source code |
| plot.intensity | Source code |
| plot.mapcomp | Source code |
| plot.sadie | Source code |
| power_law | Man page Source code |
| print.agg_index | Source code |
| print.fit_two_distr | Source code |
| print.intensity | Source code |
| print.mapcomp | Source code |
| print.mapping | Source code |
| print.sadie | Source code |
| print.smle | Source code |
| print.summary.fit_two_distr | Source code |
| print.summary.sadie | Source code |
| print.summary.smle | Source code |
| probit | Man page Source code |
| pyrethrum_ray_blight | Man page |
| qbetabinom | Man page Source code |
| rbetabinom | Man page Source code |
| rbind_param | Source code |
| remap | Man page Source code |
| sadie | Man page Source code |
| sadie.count | Man page Source code |
| sadie.data.frame | Man page Source code |
| sadie.incidence | Man page Source code |
| sadie.matrix | Man page Source code |
| severity | Man page Source code |
| severity_data | Man page Source code |
| simulated_epidemics | Man page |
| smle | Man page Source code |
| smle.default | Man page Source code |
| smle.intensity | Man page Source code |
| smle_betabinom | Man page |
| smle_binom | Man page |
| smle_nbinom | Man page |
| smle_pois | Man page |
| smle_wrappers | Man page |
| spatial_hier | Man page Source code |
| split.intensity | Man page Source code |
| str.mapping | Source code |
| sub2ind | Man page Source code |
| summary.fit_two_distr | Source code |
| summary.intensity | Source code |
| summary.sadie | Source code |
| summary.smle | Source code |
| threshold | Man page Source code |
| threshold.intensity | Source code |
| threshold.numeric | Source code |
| tobacco_viruses | Man page |
| tocamel | Source code |
| tomato_tswv | Man page |
| unmap_data | Source code |
| valid_intensity | Source code |
| vcov.smle | Man page Source code |
| wrap_transport | Source code |
| z.test | Man page Source code |
| z.test.default | Man page Source code |
| z.test.fisher | Man page Source code |
