|AR2R0||Title Calculate basic reproduction number from attack rate|
|empirical_incubation_dist||Extract empirical incubation period distribution from...|
|fit_disc_gamma||Fit discretised distributions using ML|
|fit_gamma_incubation_dist||Fit discrite gamma distribution to incubation periods|
|gamma_tools||Reparameterise Gamma distributions|
|hash_names||Anonymise data using scrypt|
|R02AR||Title Calculate attack rate from basic reproduction number|
|R02herd_immunity_threshold||Title Calculate herd immunity threshold from basic...|
|r2R0||Transform a growth rate into a reproduction number|
|sim_linelist||Simulate simple linelist data|
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