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inst/models/shiny_seird.md
In epiworldRShiny: A 'shiny' Wrapper of the R Package 'epiworldR'
SEIRD Network Model
The SEIRD Network model is the network version of the Susceptible-Exposed-Infected-Removed-Deceased model. In this version, agents are embedded in a network. The probability of infection is determined by the number of infected neighbors that an agent has.
Parameters
The SEIRD model has the following parameters:
- Disease Name: The name of the disease being modeled.
- % of Population Infected: The percentage of the population that is infected at the start of the simulation.
- Transmission probability: Probability of becoming infected (or exposed, depending on the model) when interacting with an infectious agent.
- Recovery probability (daily): The probability that an individual will recover from the virus on a given day.
- Incubation Days: The number of days that an individual is in the exposed state before becoming infectious.
- Death probability (daily): The probability that an individual will die from the virus on a given day.
- Simulation Time (Days): The number of days to simulate.
- Seed: The seed for the random number generator.
- Population Structure: The population structure to use for the simulation.
- NPIs: The non-pharmaceutical interventions to use for the simulation.
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epiworldRShiny documentation built on June 8, 2025, 1:45 p.m.
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SEIRD Network Model
The SEIRD Network model is the network version of the Susceptible-Exposed-Infected-Removed-Deceased model. In this version, agents are embedded in a network. The probability of infection is determined by the number of infected neighbors that an agent has.
Parameters
The SEIRD model has the following parameters:
- Disease Name: The name of the disease being modeled.
- % of Population Infected: The percentage of the population that is infected at the start of the simulation.
- Transmission probability: Probability of becoming infected (or exposed, depending on the model) when interacting with an infectious agent.
- Recovery probability (daily): The probability that an individual will recover from the virus on a given day.
- Incubation Days: The number of days that an individual is in the exposed state before becoming infectious.
- Death probability (daily): The probability that an individual will die from the virus on a given day.
- Simulation Time (Days): The number of days to simulate.
- Seed: The seed for the random number generator.
- Population Structure: The population structure to use for the simulation.
- NPIs: The non-pharmaceutical interventions to use for the simulation.
Try the epiworldRShiny package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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