Man pages for epm
EcoPhyloMapper
| addLegend | addLegend |
| addPhylo | addPhylo |
| addTraits | addTraits |
| betadiv_disparity | Map change in morphological disparity |
| betadiv_phylogenetic | Map phylogenetic turnover in species communities |
| betadiv_taxonomic | Map turnover in species communities |
| calcMeanShape | Calculate mean shape per grid cell |
| coordsFromEpmGrid | Retrieve coordinates from epmGrid |
| createEPMgrid | Create epmGrid object |
| customBetaDiv | Custom beta diversity metrics |
| customGridMetric | Custom grid metrics |
| dropSpecies | Drop species from epmGrid |
| DRstat | Calculate the DR statistic |
| epm | EcoPhyloMapper (epm) |
| epm-example | Eco Phylo Mapper datasets |
| epmToPhyloComm | Convert epmGrid to community matrix |
| expandSpeciesCellList | Expand species list |
| extractFromEpmGrid | Extract from epmGrid |
| faithPD | Calculate Faith's Phylogenetic Diversity |
| generateOccurrenceMatrix | Convert epmGrid to community matrix |
| getExtentOfList | Get extent of list |
| getMultiMapRamp | Extract min and max for multiple epmGrids |
| getSpPartialDisparities | Partial Disparity |
| gridMetrics | Grid Metrics |
| identify | Interactively identify species in epmGrid |
| interactiveExtent | Interactively choose extent |
| plot | Plot epmGrid |
| plotDispersionField | Plot dispersion fields |
| plotSpRange | plot a single species' range |
| rasterToGrid | Convert raster to sf grid |
| read.epmGrid | Read a epmGrid object |
| reduceToCommonTaxa | Subset epmGrid to shared taxa |
| singleSpCellIndex | Identify single-species cells |
| spCountIndex | Identify cells that have a certain number of taxa |
| summarizeEpmGridList | Summarize lists of epmGrid objects |
| summary | epmGrid summary |
| tableFromEpmGrid | Data table from epmGrid |
| write.epmGrid | Save epmGrid object |
| writeEpmSpatial | Write epmGrid Spatial Object to Disk |
