gmt2list: gmt2list: Convert GMT File to Named List

In evanverse: Utility Functions for Data Analysis and Visualization

gmt2list: Convert GMT File to Named List

Description

Reads a .gmt gene set file and returns a named list, where each list element is a gene set.

Usage

gmt2list(file, verbose = TRUE)

Arguments

file	Character. Path to a .gmt file.
verbose	Logical. Whether to print message. Default is TRUE.

Value

A named list where each element is a character vector of gene symbols.

Examples

## Not run: 
# Requires a GMT file to run:
gmt_file <- "path/to/geneset.gmt"
gene_sets <- gmt2list(gmt_file)
length(gene_sets)
names(gene_sets)[1:3]

## End(Not run)

evanverse documentation built on March 10, 2026, 5:07 p.m.