excursions: Excursion Sets and Contour Credibility Regions for Random Fields

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Functions that compute probabilistic excursion sets, contour credibility regions, contour avoiding regions, and simultaneous confidence bands for latent Gaussian random processes and fields. The package also contains functions that calculate these quantities for models estimated with the INLA package.

Author
David Bolin <davidbolin@gmail.com> and Finn Lindgren <finn.lindgren@gmail.com>
Date of publication
2016-07-21 19:13:43
Maintainer
David Bolin <davidbolin@gmail.com>
License
GPL (>= 3)
Version
2.2.2

View on CRAN

Man pages

continuous
Calculate continuous domain excursion and credible contour...
contourmap
Contour maps and contour map quality measures for latent...
contourmap.colors
Define a color map for displaying contour maps.
contourmap.inla
Contour maps and contour map quality measures for latent...
contourmap.mc
Contour maps and contour map quality measures using Monte...
excursions
Excursion sets and contour credible regions for latent...
excursions.inla
Excursion sets and contour credible regions for latent...
excursions.mc
Excursion sets and contour credible regions using Monte Carlo...
excursions.variances
Calculate variances from a sparse precision matrix
gaussint
Sequential estimation of Gaussian integrals
require.nowarnings
Warnings free loading of add-on packages
simconf
Simultaneous confidence regions for Gaussian models
simconf.inla
Simultaneous confidence regions for latent Gaussian models
simconf.mc
Simultaneous confidence regions using Monte Carlo samples
simconf.mixture
Simultaneous confidence regions for Gaussian mixture models
submesh.grid
Extract a part of a grid
submesh.mesh
Extract a part of a mesh
tricontour
Calculate contour curves on a triangulation
tricontourmap
Calculate contour curves on a triangulation

Files in this package

excursions
excursions/inst
excursions/inst/CITATION
excursions/inst/COPYRIGHTS
excursions/inst/doc
excursions/inst/doc/copying
excursions/inst/doc/copying/CAMD.txt
excursions/inst/doc/copying/SuiteSparse_config.txt
excursions/inst/doc/copying/GSL.txt
excursions/inst/GPL-3
excursions/tests
excursions/tests/testthat.R
excursions/tests/testthat
excursions/tests/testthat/test.integration.R
excursions/tests/testthat/test.excursions.inla.R
excursions/tests/testthat/test.excursions.R
excursions/tests/testthat/test.contourmap.inla.R
excursions/tests/testthat/test.variances.R
excursions/tests/testthat/test.simconf.R
excursions/tests/testthat/test.contourmap.R
excursions/tests/testthat/helper-data.R
excursions/src
excursions/src/RngStream.c
excursions/src/integration.h
excursions/src/Makevars
excursions/src/integration.cpp
excursions/src/qinv.cpp
excursions/src/SuiteSparse_config
excursions/src/SuiteSparse_config/Makefile
excursions/src/SuiteSparse_config/SuiteSparse_config.c
excursions/src/SuiteSparse_config/SuiteSparse_config.h
excursions/src/SuiteSparse_config/SuiteSparse_config.mk
excursions/src/gsl_fix.h
excursions/src/CAMD
excursions/src/CAMD/Source
excursions/src/CAMD/Source/Makefile
excursions/src/CAMD/Source/camd_defaults.c
excursions/src/CAMD/Source/camd_info.c
excursions/src/CAMD/Source/camd_preprocess.c
excursions/src/CAMD/Source/camd_order.c
excursions/src/CAMD/Source/camd_global.c
excursions/src/CAMD/Source/make_o.mk
excursions/src/CAMD/Source/camd_control.c
excursions/src/CAMD/Source/camd_postorder.c
excursions/src/CAMD/Source/camd_1.c
excursions/src/CAMD/Source/camd_valid.c
excursions/src/CAMD/Source/camd_aat.c
excursions/src/CAMD/Source/camd_2.c
excursions/src/CAMD/Source/camd_dump.c
excursions/src/CAMD/Makefile
excursions/src/CAMD/README.txt
excursions/src/CAMD/Include
excursions/src/CAMD/Include/camd.h
excursions/src/CAMD/Include/camd_internal.h
excursions/src/RngStream.h
excursions/src/reordering.cpp
excursions/src/gsl_fix.c
excursions/NAMESPACE
excursions/R
excursions/R/utils.R
excursions/R/simconf.R
excursions/R/excursions.R
excursions/R/contourmap.inla.R
excursions/R/excursions.inla.R
excursions/R/simconf.mixture.R
excursions/R/gaussint.R
excursions/R/geometry.R
excursions/R/inlautils.R
excursions/R/contourmap.R
excursions/R/simconf.inla.R
excursions/R/interface.mc.R
excursions/R/contourutil.R
excursions/MD5
excursions/DESCRIPTION
excursions/man
excursions/man/contourmap.Rd
excursions/man/simconf.mc.Rd
excursions/man/tricontour.Rd
excursions/man/simconf.Rd
excursions/man/simconf.inla.Rd
excursions/man/continuous.Rd
excursions/man/excursions.inla.Rd
excursions/man/gaussint.Rd
excursions/man/contourmap.colors.Rd
excursions/man/submesh.mesh.Rd
excursions/man/excursions.variances.Rd
excursions/man/tricontourmap.Rd
excursions/man/contourmap.inla.Rd
excursions/man/simconf.mixture.Rd
excursions/man/require.nowarnings.Rd
excursions/man/excursions.mc.Rd
excursions/man/submesh.grid.Rd
excursions/man/excursions.Rd
excursions/man/contourmap.mc.Rd