excursions: Excursion Sets and Contour Credibility Regions for Random Fields
Version 2.2.2

Functions that compute probabilistic excursion sets, contour credibility regions, contour avoiding regions, and simultaneous confidence bands for latent Gaussian random processes and fields. The package also contains functions that calculate these quantities for models estimated with the INLA package.

AuthorDavid Bolin <davidbolin@gmail.com> and Finn Lindgren <finn.lindgren@gmail.com>
Date of publication2016-07-21 19:13:43
MaintainerDavid Bolin <davidbolin@gmail.com>
LicenseGPL (>= 3)
Version2.2.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("excursions")

Popular man pages

contourmap.colors: Define a color map for displaying contour maps.
excursions: Excursion sets and contour credible regions for latent...
excursions.inla: Excursion sets and contour credible regions for latent...
excursions.variances: Calculate variances from a sparse precision matrix
require.nowarnings: Warnings free loading of add-on packages
simconf.mixture: Simultaneous confidence regions for Gaussian mixture models
submesh.grid: Extract a part of a grid
See all...

All man pages Function index File listing

Man pages

continuous: Calculate continuous domain excursion and credible contour...
contourmap: Contour maps and contour map quality measures for latent...
contourmap.colors: Define a color map for displaying contour maps.
contourmap.inla: Contour maps and contour map quality measures for latent...
contourmap.mc: Contour maps and contour map quality measures using Monte...
excursions: Excursion sets and contour credible regions for latent...
excursions.inla: Excursion sets and contour credible regions for latent...
excursions.mc: Excursion sets and contour credible regions using Monte Carlo...
excursions.variances: Calculate variances from a sparse precision matrix
gaussint: Sequential estimation of Gaussian integrals
require.nowarnings: Warnings free loading of add-on packages
simconf: Simultaneous confidence regions for Gaussian models
simconf.inla: Simultaneous confidence regions for latent Gaussian models
simconf.mc: Simultaneous confidence regions using Monte Carlo samples
simconf.mixture: Simultaneous confidence regions for Gaussian mixture models
submesh.grid: Extract a part of a grid
submesh.mesh: Extract a part of a mesh
tricontour: Calculate contour curves on a triangulation
tricontourmap: Calculate contour curves on a triangulation

Functions

Fmix Source code
Fmix_inv Source code
Pmeasure Source code
Pmeasure.bound Source code
Pmeasure.mc Source code
as.Lines.raw Source code
as.Polygons.raw Source code
as.inla.mesh.segment.outline Source code
as.sp.outline Source code
build.lattice.mesh Source code
calc.continuous.P0 Source code
connect.segments Source code
continuous Man page Source code
continuous.old Source code
contour.pixels Source code
contour.segment.pixels Source code
contourfunction Source code
contourfunction.mc Source code
contourmap Man page Source code
contourmap.colors Man page Source code
contourmap.inla Man page Source code
contourmap.marginals Source code
contourmap.marginals.mc Source code
contourmap.mc Man page Source code
display.dim.list Source code
excursions Man page Source code
excursions.call Source code
excursions.inla Man page Source code
excursions.levelplot Source code
excursions.lim.func Source code
excursions.limits Source code
excursions.marginals Source code
excursions.marginals.mc Source code
excursions.mc Man page Source code
excursions.opt.levelplot Source code
excursions.permutation Source code
excursions.rand Source code
excursions.setlimits Source code
excursions.variances Man page Source code
fmix.opt Source code
fmix.samp.opt Source code
fsamp.opt Source code
gaussint Man page Source code
generate.trigraph.properties Source code
get.geometry Source code
inla.get.marginal Source code
inla.output.indices Source code
mcint Source code
mix.sample Source code
nterpolation Source code
outline.on.grid Source code
outline.on.mesh Source code
print.excurobj Source code
print.summary.excurobj Source code
private.Cholesky Source code
private.as.dgCMatrix Source code
private.as.dgTMatrix Source code
private.as.dtCMatrix Source code
private.as.dtCMatrixU Source code
private.as.vector Source code
private.check.integer Source code
private.get.config Source code
private.link.function Source code
private.simconf.link Source code
private.sparse.gettriplet Source code
probabilitymap Source code
probabilitymap.old Source code
require.nowarnings Man page Source code
restricted.lim.func Source code
simconf Man page Source code
simconf.inla Man page Source code
simconf.mc Man page Source code
simconf.mixture Man page Source code
subdivide.mesh Source code
submesh.grid Man page Source code
submesh.mesh Man page Source code
submesh.mesh.tri Source code
summary.excurobj Source code
tricontour Man page Source code
tricontour.inla.mesh Man page Source code
tricontour.list Man page Source code
tricontour.matrix Man page Source code
tricontour_step Source code
tricontourmap Man page Source code
tricontourmap.inla.mesh Man page Source code
tricontourmap.list Man page Source code
tricontourmap.matrix Man page Source code

Files

inst
inst/CITATION
inst/COPYRIGHTS
inst/doc
inst/doc/copying
inst/doc/copying/CAMD.txt
inst/doc/copying/SuiteSparse_config.txt
inst/doc/copying/GSL.txt
inst/GPL-3
tests
tests/testthat.R
tests/testthat
tests/testthat/test.integration.R
tests/testthat/test.excursions.inla.R
tests/testthat/test.excursions.R
tests/testthat/test.contourmap.inla.R
tests/testthat/test.variances.R
tests/testthat/test.simconf.R
tests/testthat/test.contourmap.R
tests/testthat/helper-data.R
src
src/RngStream.c
src/integration.h
src/Makevars
src/integration.cpp
src/qinv.cpp
src/SuiteSparse_config
src/SuiteSparse_config/Makefile
src/SuiteSparse_config/SuiteSparse_config.c
src/SuiteSparse_config/SuiteSparse_config.h
src/SuiteSparse_config/SuiteSparse_config.mk
src/gsl_fix.h
src/CAMD
src/CAMD/Source
src/CAMD/Source/Makefile
src/CAMD/Source/camd_defaults.c
src/CAMD/Source/camd_info.c
src/CAMD/Source/camd_preprocess.c
src/CAMD/Source/camd_order.c
src/CAMD/Source/camd_global.c
src/CAMD/Source/make_o.mk
src/CAMD/Source/camd_control.c
src/CAMD/Source/camd_postorder.c
src/CAMD/Source/camd_1.c
src/CAMD/Source/camd_valid.c
src/CAMD/Source/camd_aat.c
src/CAMD/Source/camd_2.c
src/CAMD/Source/camd_dump.c
src/CAMD/Makefile
src/CAMD/README.txt
src/CAMD/Include
src/CAMD/Include/camd.h
src/CAMD/Include/camd_internal.h
src/RngStream.h
src/reordering.cpp
src/gsl_fix.c
NAMESPACE
R
R/utils.R
R/simconf.R
R/excursions.R
R/contourmap.inla.R
R/excursions.inla.R
R/simconf.mixture.R
R/gaussint.R
R/geometry.R
R/inlautils.R
R/contourmap.R
R/simconf.inla.R
R/interface.mc.R
R/contourutil.R
MD5
DESCRIPTION
man
man/contourmap.Rd
man/simconf.mc.Rd
man/tricontour.Rd
man/simconf.Rd
man/simconf.inla.Rd
man/continuous.Rd
man/excursions.inla.Rd
man/gaussint.Rd
man/contourmap.colors.Rd
man/submesh.mesh.Rd
man/excursions.variances.Rd
man/tricontourmap.Rd
man/contourmap.inla.Rd
man/simconf.mixture.Rd
man/require.nowarnings.Rd
man/excursions.mc.Rd
man/submesh.grid.Rd
man/excursions.Rd
man/contourmap.mc.Rd
excursions documentation built on May 19, 2017, 10:19 p.m.

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