exp2flux: Convert Gene EXPression Data to FBA FLUXes

For a given metabolic model with well formed Gene-Protein-Reaction (GPR) associations and an expressionSet with their associated gene expression values, this package converts gene expression values to the FBA boundaries for each reaction based in the boolean rules described in its associated GPR.

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Package details

AuthorDaniel Osorio[aut,cre], Kelly Botero[aut,cre], Janneth Gonzalez[aut], Andres Pinzon[aut]
MaintainerDaniel Osorio <dcosorioh@unal.edu.co>
Package repositoryView on CRAN
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exp2flux documentation built on May 2, 2019, 12:40 p.m.