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knitr::opts_chunk$set(echo=FALSE, warning=FALSE, message=FALSE, fig.pos = 'H', fig.align = 'center', fig.height = 6, fig.width = 10) library("expertsurv") library("ggpubr")
params$surv_plt
params$gof_plt
if(params$opinion_type != "no_expert"){ surv_expert <- list() for(i in 1:params$n_timepoint){ surv_expert[[i]] <- params[[paste0("expert_plot",i)]] } ggpubr::ggarrange(plotlist=surv_expert, #labels = , ncol = 1, nrow = params$n_timepoint) }
#https://stackoverflow.com/questions/69935356/r-markdown-use-for-loop-to-generate-text-and-display-figure-table for(i in 1:length(fit$models)){ cat("### Parameter Values ", names(fit$models)[i], "\n") if(fit$method =="mle"){ df_mod <- do.call(expertsurv:::get_stats_mle, args = list(fit,mod =i )) }else{ df_mod <- do.call(expertsurv:::get_stats_hmc, args = list(fit,mod =i)) } tb_mod <- knitr::kable(df_mod, caption = paste0("Table ",names(fit$models)[i]),digits = 3) cat("\n") print(tb_mod) cat("\n") }
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