PCA_ind_plot: Interactive PCA indivuals plot

Description Usage Arguments Author(s)

View source: R/PCA_plots.R

Description

This function generates an HTML widget displaying the individuals plot of a PCA result.

Usage

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PCA_ind_plot(res, xax = 1, yax = 2, ind_sup = TRUE,
  ind_lab_min_contrib = 0, col_var = NULL, symbol_var = NULL,
  opacity_var = NULL, size_var = NULL, size_range = c(10, 300),
  lab_var = NULL, zoom_callback = NULL, in_explor = FALSE, ...)

Arguments

res

Result of prepare_results() call

xax

Horizontal axis number

yax

Vertical axis number

ind_sup

TRUE to display supplementary individuals

ind_lab_min_contrib

Contribution threshold to display points labels

col_var

variable to be used for points color

symbol_var

name of the variable for points symbol

opacity_var

name of the variable for points opacity

size_var

name of the variable for points size

size_range

points size range with format c(minimum, maximum)

lab_var

variable to be used for points names

zoom_callback

scatterD3 zoom callback JavaScript body

in_explor

wether the plot is to be displayed in the explor interface

...

Other arguments passed to scatterD3

Author(s)

Julien Barnier <[email protected]>


explor documentation built on Oct. 10, 2017, 5:06 p.m.