exreport: Fast, Reliable and Elegant Reproducible Research
Version 0.4.1

Analysis of experimental results and automatic report generation in both interactive HTML and LaTeX. This package ships with a rich interface for data modeling and built in functions for the rapid application of statistical tests and generation of common plots and tables with publish-ready quality.

AuthorJacinto Arias [aut, cre], Javier Cozar [aut]
Date of publication2016-02-01 22:01:15
MaintainerJacinto Arias <jacinto.arias@uclm.es>
LicenseGPL-2
Version0.4.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("exreport")

Getting started

README.md

Popular man pages

expExtend: Extend an experiment by adding new parameters
expRemoveDuplicated: Remove duplicated rows from an experiment
expRename: Change the name of elements that an experiment contains
expSubset: Obtains a subset of an experiment matching the given...
exreport: Create a new exreport document
exreportAdd: Add elements to an existing exreport document
tabularTestSummary: Summarize the result of a multiple comparison statistical...
See all...

All man pages Function index File listing

Man pages

expCombine: Combine two experiments with different outputs
expConcat: Concatenate rows of matching experiments
expCreate: Load data and create an exreport experiment
expCreateFromTable: Create an exreport experiment from a tabular representation
expExtend: Extend an experiment by adding new parameters
expExtract: Extract statistically equivalent methods from a multiple...
expGetDuplicated: Create a new experiment with only the duplicated rows
expInstantiate: Instatiate the methods in the experiment for each one of the...
expReduce: Reduce a parameter by a function for each method, problem and...
expRemoveDuplicated: Remove duplicated rows from an experiment
expRename: Change the name of elements that an experiment contains
expReorder: Change the order of elements that an experiment contains
expSubset: Obtains a subset of an experiment matching the given...
exreport: Create a new exreport document
exreportAdd: Add elements to an existing exreport document
exreportRender: Render an exreport document
plotCumulativeRank: Area plot for the rank distribution from a multiple test
plotExpSummary: Barplot for summarizing an experiment output variable
plotRankDistribution: Boxplot for the ranks distribution and control hypotheses...
tabularExpSummary: Summarize the experiment with a table for given outputs
tabularTestPairwise: Display pairwise information about a multiple test between...
tabularTestSummary: Summarize the result of a multiple comparison statistical...
testMultipleControl: Multiple Comparison Statistical Test (Friedman + Control Holm...
testMultiplePairwise: Multiple Comparison Statistical Test (Friedman + Pairwise...
testPaired: Paired Wilcoxon statistical test
wekaExperiment: Problem: Comparison between several Machine Learning...

Functions

callErrorMessage Source code
callWarningMessage Source code
createDepthStructure Source code
doFriedmanTest Source code
duplicates Source code
exPlot Source code
exReport Source code
exTabular Source code
expCombine Man page Source code
expConcat Man page Source code
expCreate Man page Source code
expCreateFromTable Man page Source code
expExtend Man page Source code
expExtract Man page Source code
expGetDuplicated Man page Source code
expInstantiate Man page Source code
expReduce Man page Source code
expRemoveDuplicated Man page Source code
expRename Man page Source code
expReorder Man page Source code
expSubset Man page Source code
experiment Source code
exreport Man page Source code
exreportAdd Man page Source code
exreportRender Man page Source code
exreportRenderHTML Source code
exreportRenderPDF Source code
formatDataFrame Source code
formatDataFrameHTML Source code
formatDataFrameLatex Source code
is.exPlot Source code
is.exReport Source code
is.exTabular Source code
is.experiment Source code
is.metaTags Source code
is.phMetric Source code
is.reportable Source code
is.testFriedman Source code
is.testMultiple Source code
is.testMultipleControl Source code
is.testMultiplePairwise Source code
is.testPaired Source code
loadHTMLTemplate Source code Source code
loadLatexTemplate Source code
metaTags Source code
mlTableTranspose Source code
names.experiment Source code
nestedList2HTML Source code
nestedList2Latex Source code
nestedList2String Source code
orderCascade Source code
phMetric Source code
phMetricPvalues Source code
phMetricRanks Source code
phMetricWTL Source code
plotCumulativeRank Man page Source code
plotExpSummary Man page Source code
plotRankDistribution Man page Source code
print.exPlot Source code
print.exReport Source code
print.exTabular Source code
print.experiment Source code
print.phMetric Source code
print.testFriedman Source code
print.testMultiple Source code
print.testMultipleControl Source code
print.testMultiplePairwise Source code
print.testPaired Source code
print2exreport Source code
print2exreport.exPlot Source code
print2exreport.exTabular Source code
print2exreport.experiment Source code
print2exreport.testFriedman Source code
print2exreport.testMultiple Source code
print2exreport.testPaired Source code
replaceVarsForContent Source code
sanitizeLatexCode Source code
shafferS Source code
shafferSIterative Source code
statisticsFriedman Source code
statisticsGeneralControl Source code
statisticsGeneralPairwise Source code
statisticsHolmsAdjustemnt Source code
statisticsImanDavenport Source code
statisticsShafferAdjustemnt Source code
statisticsWilcoxon Source code
summary.exPlot Source code
summary.exReport Source code
summary.exTabular Source code
summary.experiment Source code
summary.testFriedman Source code
summary.testMultipleControl Source code
summary.testMultiplePairwise Source code
summary.testPaired Source code
tabularExpSummary Man page Source code
tabularTestPairwise Man page Source code
tabularTestSummary Man page Source code
testFriedman Source code
testMultiple Source code
testMultipleControl Man page Source code Source code
testMultiplePairwise Man page Source code Source code
testPaired Man page Source code Source code
toString.experiment Source code
updateTags Source code
wekaExperiment Man page

Files

inst
inst/staticdocs
inst/staticdocs/content-topic.html
inst/staticdocs/layout.html
inst/staticdocs/header.html
inst/staticdocs/head.html
inst/staticdocs/content-index.html
inst/staticdocs/footer.html
inst/staticdocs/index.r
inst/extdata
inst/extdata/latexTemplates
inst/extdata/latexTemplates/exTabular_plain.txt
inst/extdata/latexTemplates/experiment.txt
inst/extdata/latexTemplates/assets
inst/extdata/latexTemplates/assets/imports.tex
inst/extdata/latexTemplates/assets/commands.tex
inst/extdata/latexTemplates/main_end.txt
inst/extdata/latexTemplates/wilcoxon.txt
inst/extdata/latexTemplates/exTabular_phtest.txt
inst/extdata/latexTemplates/friedman.txt
inst/extdata/latexTemplates/main_start.txt
inst/extdata/latexTemplates/exPlot.txt
inst/extdata/htmlTemplates
inst/extdata/htmlTemplates/exTabular_plain.txt
inst/extdata/htmlTemplates/experiment.txt
inst/extdata/htmlTemplates/assets
inst/extdata/htmlTemplates/assets/bootstrap.min.css
inst/extdata/htmlTemplates/assets/scripts.js
inst/extdata/htmlTemplates/assets/jquery.js
inst/extdata/htmlTemplates/assets/bootstrap.min.js
inst/extdata/htmlTemplates/main_end.txt
inst/extdata/htmlTemplates/wilcoxon.txt
inst/extdata/htmlTemplates/exTabular_phtest.txt
inst/extdata/htmlTemplates/friedman.txt
inst/extdata/htmlTemplates/main_start.txt
inst/extdata/htmlTemplates/exPlot.txt
NAMESPACE
data
data/wekaExperiment.rda
R
R/fun_expReorder.R
R/class_exTabular.R
R/class_testPaired.R
R/utils_addDoc.R
R/fun_tabularExpSummary.R
R/class_testFriedman.R
R/fun_expConcat.R
R/fun_testPaired.R
R/utils_statistics.R
R/utils_reportGenerator.R
R/utils_tables.R
R/fun_expRename.R
R/utils_list.R
R/class_testMultiplePairwise.R
R/fun_exreport.R
R/fun_expCreate.R
R/class_metaTags.R
R/fun_testMultipleControl.R
R/fun_plotExpSummary.R
R/class_testMultipleControl.R
R/class_testMultiple.R
R/fun_expReduce.R
R/fun_tabularTestSummary.R
R/utils_strings.R
R/class_exPlot.R
R/class_phMetric.R
R/utils_phMetric.R
R/fun_plotCumulativeRank.R
R/fun_expExtract.R
R/fun_expGetDuplicated.R
R/fun_expCombine.R
R/utils_text.R
R/fun_plotRankDistribution.R
R/fun_expRemoveDuplicated.R
R/fun_expExtend.R
R/fun_tabularTestPairwise.R
R/fun_testMultiplePairwise.R
R/fun_expSubset.R
R/class_exReport.R
R/class_experiment.R
R/fun_expInstantiate.R
README.md
MD5
DESCRIPTION
man
man/expCombine.Rd
man/testMultiplePairwise.Rd
man/expCreateFromTable.Rd
man/tabularTestSummary.Rd
man/tabularExpSummary.Rd
man/testPaired.Rd
man/expExtend.Rd
man/expRename.Rd
man/expReorder.Rd
man/plotRankDistribution.Rd
man/expConcat.Rd
man/testMultipleControl.Rd
man/expGetDuplicated.Rd
man/exreport.Rd
man/exreportRender.Rd
man/plotExpSummary.Rd
man/exreportAdd.Rd
man/plotCumulativeRank.Rd
man/expInstantiate.Rd
man/wekaExperiment.Rd
man/tabularTestPairwise.Rd
man/expExtract.Rd
man/expRemoveDuplicated.Rd
man/expSubset.Rd
man/expCreate.Rd
man/expReduce.Rd
exreport documentation built on May 19, 2017, 10:47 a.m.

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