scrub_plot: '"scrub"' plot sub-function
In fMRIscrub: Scrubbing and Other Data Cleaning Routines for fMRI

scrub_plot

R Documentation

`"scrub"` plot sub-function

Description

Plot outlyingness measure(s) with the corresponding threshold(s). Requires the cowplot and ggplot2 packages

Usage

scrub_plot(
  meas,
  cut = NULL,
  flag_intersect = FALSE,
  colors = NULL,
  log_y = FALSE,
  geom = "point",
  ylim_min = 0,
  ylim_max = max(meas$measure),
  ...
)

Arguments

`meas`	A `T` by `m` numeric data.frame with each column being the timecourse for an outlyingness measure. The names of the columns will be used to label the plot.
`cut`	A length `m` numeric vector with each value being the cutoff for an outlyingness measure (each column in `meas`).
`flag_intersect`	Only flag timepoints at which all measures are outliers? Default: `FALSE`.
`colors`	A length `m` character vector giving the colors of each measure (each column in `meas`)
`log_y`	Use log scale for y-axis? Default: `FALSE`
`geom`	"point" (default) or "line"
`ylim_min, ylim_max`	The range of the y-axis.
`...`	Additional arguments to ggplot: main, sub, xlab, ...