API for fMRItools
Routines for Common fMRI Processing Tasks

Global functions
CompCor Man page Source code
CompCor.noise_comps Man page Source code
CompCor_HCP Man page Source code
Hz2dct Man page Source code
Mode Man page Source code
PCA Man page Source code
UT2mat Man page Source code
all_binary Man page Source code
all_integers Man page Source code
as.matrix_ifti Man page Source code
bandstop_filter Man page Source code
carpetplot Man page Source code
carpetplot_stack Man page Source code
check_req_ifti_pkg Man page Source code
colCenter Man page Source code
color_palette Man page Source code
coordlist_to_vol Man page Source code
cor_mat Man page Source code
crop_vol Man page Source code
data_CompCor_Params Man page
dct2Hz Man page Source code
dct_bases Man page Source code
dct_convert Man page Source code
despike_3D Man page Source code
despike_3D.interpolate Man page Source code
despike_3D.qreg Man page Source code
detrend Man page Source code
dilate_mask_vol Man page Source code
dim_reduce Man page Source code
dual_reg Man page Source code
dual_reg_parc Man page Source code
erode_mask_vol Man page Source code
expand_RPs Man page Source code
fMRItools Man page
fMRItools-package Man page
fft_detrend Man page Source code
format_data Man page Source code
format_path Man page Source code
fsl_bptf Man page Source code
get_FORMAT Man page Source code
get_NIFTI_ROI_masks Man page Source code
get_kwargs Man page Source code
hat_matrix Man page Source code
image_scale Man page Source code
infer_format_ifti Man page Source code
infer_format_ifti_vec Man page Source code
is.fname Man page Source code
is_1 Man page Source code
is_constant Man page Source code
is_integer Man page Source code
is_posNum Man page Source code
make_mask Man page Source code
mat2UT Man page Source code
match_exactly Man page Source code
match_input Man page Source code
mean_squares Man page Source code
merge_kwargs Man page Source code
noise_Params Man page
norm_BOLD Man page Source code
nuisance_regression Man page Source code
pad_vol Man page Source code
pct_sig Man page Source code
plot_FC Man page Source code
read_nifti Man page Source code
rowMedians2 Man page Source code
scale_design_mat Man page Source code
scale_med Man page Source code
scale_timeseries Man page Source code
sign_flip Man page Source code
skew_pos Man page Source code
sum_neighbors_vol Man page Source code
sys_path Man page Source code
temporal_filter Man page Source code
uncrop_vol Man page Source code
unmask_mat Man page Source code
unvec_mat Man page Source code
unvec_vol Man page Source code
validate_design_mat Man page Source code
var_decomp Man page Source code
vox_locations Man page Source code
fMRItools documentation built on April 12, 2025, 1:32 a.m.