Files in fMRItools

Routines for Common fMRI Processing Tasks

NEWS.md README.md R/as.matrix_ifti.R R/bandstop_filter.R R/carpetplot.R R/utils_mat.R R/UT.R R/norm_BOLD.R R/utils_checkValue.R R/despike_3D.R R/expand_RPs.R R/rox_args_docs.R R/plot_FC.R R/utils_volume.R R/CompCor_HCP.R R/format_data.R R/fsl_bptf.R R/PCA.R R/read_nifti.R R/scale_matrix.R R/CompCor.R R/dual_reg.R R/utils_misc.R R/validate_design_matrix.R R/utils_args.R R/var_decomp.R R/utils_files.R R/dim_reduce.R R/dual_reg_parc.R R/fMRItools-package.R R/DCT_FFT_detrending.R R/infer_format_ifti.R R/hat_matrix.R R/nuisance_regression.R tests/testthat.R tests/run_fMRItools_tests.R tests/testthat/test-misc.R man/despike_3D.qreg.Rd man/as.matrix_ifti.Rd man/dct_bases.Rd man/validate_design_mat.Rd man/scale_med.Rd man/pct_sig.Rd man/CompCor.noise_comps.Rd man/cor_mat.Rd man/is_constant.Rd man/mat2UT.Rd man/CompCor.Rd man/get_NIFTI_ROI_masks.Rd man/rowMedians2.Rd man/data_CompCor_Params.Rd man/erode_mask_vol.Rd man/despike_3D.interpolate.Rd man/nuisance_regression.Rd man/mean_squares.Rd man/format_path.Rd man/UT2mat.Rd man/carpetplot_stack.Rd man/norm_BOLD.Rd man/unmask_mat.Rd man/carpetplot.Rd man/expand_RPs.Rd man/get_FORMAT.Rd man/coordlist_to_vol.Rd man/crop_vol.Rd man/skew_pos.Rd man/Mode.Rd man/dual_reg.Rd man/noise_Params.Rd man/temporal_filter.Rd man/fft_detrend.Rd man/dim_reduce.Rd man/merge_kwargs.Rd man/scale_design_mat.Rd man/plot_FC.Rd man/make_mask.Rd man/all_integers.Rd man/dilate_mask_vol.Rd man/fsl_bptf.Rd man/vox_locations.Rd man/var_decomp.Rd man/despike_3D.Rd man/match_exactly.Rd man/CompCor_HCP.Rd man/is_integer.Rd man/read_nifti.Rd man/colCenter.Rd man/format_data.Rd man/unvec_vol.Rd man/unvec_mat.Rd man/check_req_ifti_pkg.Rd man/dual_reg_parc.Rd man/bandstop_filter.Rd man/color_palette.Rd man/match_input.Rd man/hat_matrix.Rd man/image_scale.Rd man/sys_path.Rd man/dct_convert.Rd man/fMRItools.Rd man/is.fname.Rd man/infer_format_ifti.Rd man/is_1.Rd man/pad_vol.Rd man/all_binary.Rd man/get_kwargs.Rd man/infer_format_ifti_vec.Rd man/PCA.Rd man/sum_neighbors_vol.Rd man/is_posNum.Rd man/scale_timeseries.Rd man/sign_flip.Rd