fastcluster: Fast Hierarchical Clustering Routines for R and Python

This is a two-in-one package which provides interfaces to both R and Python. It implements fast hierarchical, agglomerative clustering routines. Part of the functionality is designed as drop-in replacement for existing routines: linkage() in the SciPy package 'scipy.cluster.hierarchy', hclust() in R's 'stats' package, and the 'flashClust' package. It provides the same functionality with the benefit of a much faster implementation. Moreover, there are memory-saving routines for clustering of vector data, which go beyond what the existing packages provide. For information on how to install the Python files, see the file INSTALL in the source distribution.

Install the latest version of this package by entering the following in R:
install.packages("fastcluster")
AuthorDaniel Müllner [aut, cph, cre]
Date of publication2016-12-09 08:58:55
MaintainerDaniel Müllner <daniel@danifold.net>
LicenseFreeBSD | GPL-2 | file LICENSE
Version1.1.22
http://danifold.net/fastcluster.html

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Files

inst
inst/CITATION
inst/doc
inst/doc/fastcluster.pdf
inst/doc/fastcluster.Rtex
tests
tests/test_fastcluster.R
src
src/fastcluster.cpp
src/Makevars
src/python
src/python/fastcluster.py
src/python/tests
src/python/tests/__init__.py
src/python/tests/test.py
src/python/tests/nantest.py
src/python/tests/vectortest.py
src/python/setup.py
src/python/fastcluster_python.cpp
src/fastcluster_R.cpp
src/Makevars.win
NAMESPACE
INSTALL
NEWS
R
R/fastcluster.R
vignettes
vignettes/Makefile
vignettes/fastcluster.Rtex
MD5
README
build
build/vignette.rds
DESCRIPTION
man
man/hclust.Rd man/fastcluster.Rd man/hclust.vector.Rd
LICENSE

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.