fastcluster: Fast Hierarchical Clustering Routines for R and Python

This is a two-in-one package which provides interfaces to both R and Python. It implements fast hierarchical, agglomerative clustering routines. Part of the functionality is designed as drop-in replacement for existing routines: linkage() in the SciPy package 'scipy.cluster.hierarchy', hclust() in R's 'stats' package, and the 'flashClust' package. It provides the same functionality with the benefit of a much faster implementation. Moreover, there are memory-saving routines for clustering of vector data, which go beyond what the existing packages provide. For information on how to install the Python files, see the file INSTALL in the source distribution.

Author
Daniel Müllner [aut, cph, cre]
Date of publication
2016-09-19 14:47:11
Maintainer
Daniel Müllner <daniel@danifold.net>
License
FreeBSD | GPL-2 | file LICENSE
Version
1.1.21
URLs

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Man pages

fastcluster
Fast hierarchical, agglomerative clustering routines for R...
hclust
Fast hierarchical, agglomerative clustering of dissimilarity...
hclust.vector
Fast hierarchical, agglomerative clustering of vector data

Files in this package

fastcluster
fastcluster/inst
fastcluster/inst/CITATION
fastcluster/inst/doc
fastcluster/inst/doc/fastcluster.pdf
fastcluster/inst/doc/fastcluster.Rtex
fastcluster/tests
fastcluster/tests/test_fastcluster.R
fastcluster/src
fastcluster/src/fastcluster.cpp
fastcluster/src/Makevars
fastcluster/src/python
fastcluster/src/python/fastcluster.py
fastcluster/src/python/tests
fastcluster/src/python/tests/__init__.py
fastcluster/src/python/tests/test.py
fastcluster/src/python/tests/nantest.py
fastcluster/src/python/tests/vectortest.py
fastcluster/src/python/setup.py
fastcluster/src/python/fastcluster_python.cpp
fastcluster/src/fastcluster_R.cpp
fastcluster/src/Makevars.win
fastcluster/NAMESPACE
fastcluster/INSTALL
fastcluster/NEWS
fastcluster/R
fastcluster/R/fastcluster.R
fastcluster/vignettes
fastcluster/vignettes/Makefile
fastcluster/vignettes/fastcluster.Rtex
fastcluster/MD5
fastcluster/README
fastcluster/build
fastcluster/build/vignette.rds
fastcluster/DESCRIPTION
fastcluster/man
fastcluster/man/hclust.Rd
fastcluster/man/fastcluster.Rd
fastcluster/man/hclust.vector.Rd
fastcluster/LICENSE