fdrci: Permutation-Based FDR Point and Confidence Interval Estimation

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FDR functions for permutation-based estimators, including pi0 as well as FDR confidence intervals. The confidence intervals account for dependencies between tests by the incorporation of an overdispersion parameter, which is estimated from the permuted data.

Author
Joshua Millstein
Date of publication
2016-11-15 19:45:37
Maintainer
Joshua Millstein <joshua.millstein@usc.edu>
License
Artistic-2.0
Version
2.1

View on CRAN

Man pages

fdrci-package
Permutation-Based FDR Point and Confidence Interval...
fdr_od
Permutation-Based FDR and Confidence Interval
FDRplot
Plot FDR Table Results
fdrTbl
FDR Estimate and Confidence Interval Sequence Table

Files in this package

fdrci
fdrci/inst
fdrci/inst/CITATION
fdrci/NAMESPACE
fdrci/R
fdrci/R/fdrTbl.R
fdrci/R/fdr_od.R
fdrci/R/FDRplot.R
fdrci/MD5
fdrci/DESCRIPTION
fdrci/man
fdrci/man/fdrci-package.Rd
fdrci/man/fdrTbl.Rd
fdrci/man/fdr_od.Rd
fdrci/man/FDRplot.Rd