Man pages for file2meco
Transform Files to 'microtable' Object with 'microeco' Package
| check_match_table | Replace the names use match table |
| check_sample_table | Read sample table |
| CHOCOPhlAn_taxonomy | The CHOCOPhlAn_taxonomy data |
| file2meco | Introduction to file2meco package... |
| humann2meco | Transform 'HUMAnN' metagenomic results to 'microtable'... |
| meco2phyloseq | Transform 'microtable' object of 'microeco' package to the... |
| meco2tse | Transform 'microtable' object of 'microeco' package to the... |
| MetaCyc_pathway_map | The MetaCyc_pathway_map data |
| metacyc_pathway_website | Get the website for a 'MetaCyc' pathway name |
| mpa2meco | Transform metagenomic classification results of 'mpa' format... |
| ncyc2meco | Transform 'NCycDB' or 'PCycDB' metagenomic abundance to... |
| ncyc_map | The ncyc_map data |
| pcyc_map | The pcyc_map data |
| phyloseq2meco | Transform the 'phyloseq' object of 'phyloseq' package to... |
| qiime1meco | Transform 'QIIME' results to 'microtable' object. |
| qiime2meco | Transform 'QIIME2' results to 'microtable' object. |
| tse2meco | Transform the 'TreeSummarizedExperiment' object to... |
| vs2meco | Transform viromescan results to 'microtable' object. |
