foodingraph: Food Network Inference and Visualization

Displays a weighted undirected food graph from an adjacency matrix. Can perform confidence-interval bootstrap inference with mutual information or maximal information coefficient. Based on my Master 1 internship at the Bordeaux Population Health center. References : Reshef et al. (2011) <doi:10.1126/science.1205438>, Meyer et al. (2008) <doi:10.1186/1471-2105-9-461>, Liu et al. (2016) <doi:10.1371/journal.pone.0158247>.

Package details

AuthorVictor Gasque [cre, aut], Boris Hejblum [aut], Cecilia Samieri [aut]
MaintainerVictor Gasque <[email protected]>
LicenseGPL-3
Version0.1.0
URL https://github.com/vgasque/foodingraph/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("foodingraph")

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foodingraph documentation built on Oct. 6, 2019, 5:06 p.m.