fracprolif: Fraction Proliferation via a Quiescent Growth Model

Functions for fitting data to a quiescent growth model, i.e. a growth process that involves members of the population who stop dividing or propagating.

Author
Shawn Garbett, Darren Tyson
Date of publication
2015-04-27 18:58:56
Maintainer
Shawn Garbett <Shawn@Garbett.org>
License
GPL-2 | file LICENSE
Version
1.0.6

View on CRAN

Man pages

ca1d.erlotinib
CA1d cells in 16 micromolar erlotinib
ca1d.erlotinib.totals
CA1d cell counts in various concentrations erlotinib
fracprolif-package
Fractional Proliferation.
prolif_d
Expected Propagating Subpopulation
prolif_fd
Fraction of Population Propagating
prolif_fq
Fraction of Population Quiescent
prolif_q
Expected Quiescent Subpopulation
prolif_tot
Expected Proliferation Total
q.mle.emg.estimate
Estimate Distribution Parameters based on EMG survival
q.mle.norm.estimate
Estimate Distribution Parameters based on EMG survival
qrate-class
Class '"qrate"'
q.rates
Estimate Quiescence-Growth Model Rates
qsurvival.nllik
Negative Log-Likelihood of a Survival Function
split
Piecewise curves for rates which change in the middle of an...

Files in this package

fracprolif
fracprolif/NAMESPACE
fracprolif/data
fracprolif/data/ca1d.erlotinib.rda
fracprolif/data/ca1d.erlotinib.totals.rda
fracprolif/R
fracprolif/R/qsurvival.nllik.R
fracprolif/R/prolif_q.R
fracprolif/R/prolif_d.R
fracprolif/R/prolif_fq.R
fracprolif/R/prolif_tot.R
fracprolif/R/q.rates.R
fracprolif/R/split.R
fracprolif/R/q.mle.norm.estimate.R
fracprolif/R/q.mle.emg.estimate.R
fracprolif/R/prolif_fd.R
fracprolif/MD5
fracprolif/DESCRIPTION
fracprolif/man
fracprolif/man/q.mle.norm.estimate.Rd
fracprolif/man/qsurvival.nllik.Rd
fracprolif/man/fracprolif-package.Rd
fracprolif/man/prolif_d.Rd
fracprolif/man/q.mle.emg.estimate.Rd
fracprolif/man/qrate-class.Rd
fracprolif/man/q.rates.Rd
fracprolif/man/split.Rd
fracprolif/man/prolif_fq.Rd
fracprolif/man/prolif_tot.Rd
fracprolif/man/prolif_fd.Rd
fracprolif/man/ca1d.erlotinib.Rd
fracprolif/man/ca1d.erlotinib.totals.Rd
fracprolif/man/prolif_q.Rd
fracprolif/LICENSE