gProfileR: Interface to the 'g:Profiler' Toolkit

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Functional enrichment analysis, gene identifier conversion and mapping homologous genes across related organisms via the 'g:Profiler' toolkit (http://biit.cs.ut.ee/gprofiler/).

Author
Juri Reimand <juri.reimand@ut.ee>, Raivo Kolde <rkolde@gmail.com>, Tambet Arak <tambet.arak@gmail.com>
Date of publication
2016-04-27 18:56:49
Maintainer
Tambet Arak <tambet.arak@gmail.com>
License
GPL (>= 2)
Version
0.6.1

View on CRAN

Man pages

gconvert
Convert gene IDs.
get_base_url
Get the base URL.
get_user_agent
Get current user agent string.
gorth
Find orthologs.
gprofiler
Annotate gene list functionally.
set_base_url
Set the base URL.
set_user_agent
Set custom user agent string.

Files in this package

gProfileR
gProfileR/NAMESPACE
gProfileR/R
gProfileR/R/gProfileR.R
gProfileR/MD5
gProfileR/DESCRIPTION
gProfileR/ChangeLog
gProfileR/man
gProfileR/man/get_base_url.Rd
gProfileR/man/get_user_agent.Rd
gProfileR/man/gprofiler.Rd
gProfileR/man/gorth.Rd
gProfileR/man/gconvert.Rd
gProfileR/man/set_base_url.Rd
gProfileR/man/set_user_agent.Rd