collect.data_request: Retrieve a database query

In galah: Biodiversity Data from the GBIF Node Network

Retrieve a database query

Description

collect() attempts to retrieve the result of a query from the selected API.

Usage

## S3 method for class 'data_request'
collect(x, ..., wait = TRUE, file = NULL)

## S3 method for class 'metadata_request'
collect(x, ...)

## S3 method for class 'files_request'
collect(x, ...)

## S3 method for class 'query'
collect(x, ..., wait = TRUE, file = NULL)

## S3 method for class 'computed_query'
collect(x, ..., wait = TRUE, file = NULL)

Arguments

x	An object of class data_request, metadata_request or files_request (from galah_call()); or an object of class query_set or query (from collapse() or compute())
...	Arguments passed on to other methods
wait	logical; should galah wait for a response? Defaults to FALSE. Only applies for type = "occurrences" or "species".
file	(Optional) file name. If not given, will be set to data with date and time added. The file path (directory) is always given by galah_config()$package$directory.

Value

In most cases, collect() returns a tibble containing requested data. Where the requested data are not yet ready (i.e. for occurrences when wait is set to FALSE), this function returns an object of class query that can be used to recheck the download at a later time.

galah documentation built on April 4, 2025, 1:12 a.m.