AtlanticFish: Dataset of Mid-Atlantic Highlands Fish

In gcKrig: Analysis of Geostatistical Count Data using Gaussian Copulas

Dataset of Mid-Atlantic Highlands Fish

Description

This dataset was studied by Johnson and Hoeting (2011) for analyzing pollution tolerance in Mid-Atlantic Highlands Fish. Pollution intolerant fish were sampled, and several stream characteristics were measured to assess water quality at 119 sites in the Mid-Atlantic region of the United States. All covariates of the data had been standardized to have mean 0 and variance 1.

Usage

data(AtlanticFish)

Format

A data frame with 119 observations and 12 variables.

LON

Longitude of the location.

LAT

Latitude of the location.

ABUND

Fish abundance at given locations, the discrete response.

ORDER

Strahler stream order, a natural covariate measuring stream size.

DISTOT

Watershed classified as disturbed by human activity, a variable reflecting stream quality.

HAB

An index of fish habitat quality at the stream site, a variable reflecting stream quality.

WSA

Watershed area, a natural covariate.

ELEV

Elevation.

RD

Road density in the watershed, a variable reflecting stream quality.

DO

Concentration of dissolved oxygen in the stream at the sampling site, a stream quality variable.

XFC

Percent of areal fish cover at the sampling site, a stream quality variable.

PCT

Percent of sand in streambed substrate, a stream quality variable.

References

Johnson, D. and Hoeting, J. (2011) Bayesian Multimodel Inference for Geostatistical Regression Models, PLOS ONE, 6:e25677. https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0025677.

Examples

data(AtlanticFish)
str(AtlanticFish)

gcKrig documentation built on July 3, 2022, 1:05 a.m.