gemtc: Network Meta-Analysis Using Bayesian Methods

Network meta-analyses (mixed treatment comparisons) in the Bayesian framework using JAGS. Includes methods to assess heterogeneity and inconsistency, and a number of standard visualizations.

AuthorGert van Valkenhoef, Joel Kuiper
Date of publication2016-12-23 11:56:29
MaintainerGert van Valkenhoef <gert@gertvv.nl>
LicenseGPL-3
Version0.8-2
http://github.com/gertvv/gemtc

View on CRAN

Functions

as.data.frame.mtc.relative.effect.table Man page
as.mcmc.list.mtc.result Man page
atrialFibrillation Man page
blobbogram Man page
blocker Man page
certolizumab Man page
depression Man page
dietfat Man page
forest Man page
forest.mtc.relative.effect.table Man page
forest.mtc.result Man page
gemtc Man page
gemtc-package Man page
hfPrevention Man page
ll.call Man page
mtc Man page
mtc.anohe Man page
mtc.data.studyrow Man page
mtc.deviance Man page
mtc.devplot Man page
mtc.hy.empirical.lor Man page
mtc.hy.prior Man page
mtc.levplot Man page
mtc.model Man page
mtc.network Man page
mtc.nodesplit Man page
mtc.nodesplit.comparisons Man page
mtc.result Man page
mtc.run Man page
parkinson Man page
parkinson_diff Man page
parkinson_shared Man page
plotCovariateEffect Man page
plot.mtc.anohe Man page
plot.mtc.anohe.summary Man page
plot.mtc.deviance Man page
plot.mtc.model Man page
plot.mtc.network Man page
plot.mtc.nodesplit Man page
plot.mtc.nodesplit.summary Man page
plot.mtc.rank.probability Man page
plot.mtc.result Man page
print.mtc.anohe Man page
print.mtc.anohe.summary Man page
print.mtc.model Man page
print.mtc.nodesplit Man page
print.mtc.nodesplit.summary Man page
print.mtc.rank.probability Man page
print.mtc.relative.effect.table Man page
print.mtc.result Man page
rank.probability Man page
read.mtc.network Man page
relative.effect Man page
relative.effect.table Man page
smoking Man page
summary.mtc.anohe Man page
summary.mtc.model Man page
summary.mtc.nodesplit Man page
summary.mtc.result Man page
thrombolytic Man page

Files

gemtc
gemtc/inst
gemtc/inst/gemtc.likelihood.poisson.txt
gemtc/inst/gemtc.fixedeffect.txt
gemtc/inst/gemtc.randomeffects.txt
gemtc/inst/gemtc.releffect.likelihood.rm.txt
gemtc/inst/gemtc.model.use.template.txt
gemtc/inst/gemtc.armeffect.likelihood.txt
gemtc/inst/gemtc.releffect.likelihood.r2.txt
gemtc/inst/gemtc.likelihood.normal.txt
gemtc/inst/gemtc.likelihood.normal.power.txt
gemtc/inst/gemtc.likelihood.poisson.power.txt
gemtc/inst/gemtc.releffect.likelihood.power.rm.txt
gemtc/inst/gemtc.likelihood.binom.txt
gemtc/inst/extdata
gemtc/inst/extdata/luades-smoking.gemtc
gemtc/inst/extdata/parkinson.ns.rds
gemtc/inst/extdata/parkinson.gemtc
gemtc/inst/extdata/luades-smoking.samples.gz
gemtc/inst/gemtc.releffect.likelihood.power.r2.txt
gemtc/inst/gemtc.model.template.txt
gemtc/inst/gemtc.likelihood.binom.power.txt
gemtc/tests
gemtc/tests/data
gemtc/tests/data/studyrow
gemtc/tests/data/studyrow/tsd2-7.data.txt
gemtc/tests/data/studyrow/tsd2-2.data.txt
gemtc/tests/data/studyrow/tsd2-5.data.txt
gemtc/tests/data/studyrow/tsd2-5.out.txt
gemtc/tests/data/studyrow/tsd2-3.out.txt
gemtc/tests/data/studyrow/tsd2-2.out.txt
gemtc/tests/data/studyrow/tsd2-8.data1.txt
gemtc/tests/data/studyrow/tsd2-8.out1.txt
gemtc/tests/data/studyrow/tsd2-8.out2.txt
gemtc/tests/data/studyrow/tsd2-8.data2.txt
gemtc/tests/data/studyrow/tsd2-1.data.txt
gemtc/tests/data/studyrow/tsd2-1.out.txt
gemtc/tests/data/studyrow/tsd2-7.out.txt
gemtc/tests/data/studyrow/tsd2-3.data.txt
gemtc/tests/data/riskratio.data.txt
gemtc/tests/data/diabetes-surv.summaries.txt
gemtc/tests/data/welton-diastolic.summaries.txt
gemtc/tests/data/diabetes-surv.data.txt
gemtc/tests/data/parkinson-shared.summaries.txt
gemtc/tests/data/dietfat.re.summaries.txt
gemtc/tests/data/luades-thrombolytic.summaries.txt
gemtc/tests/data/smoking-ume.data.txt
gemtc/tests/data/diabetes-surv.fe.summaries.txt
gemtc/tests/data/riskratio.summaries.txt
gemtc/tests/data/welton-cholesterol.summaries.txt
gemtc/tests/data/welton-cholesterol.gemtc
gemtc/tests/data/rr-pairwise.csv
gemtc/tests/data/ns-complex.csv
gemtc/tests/data/smoking-ume.summaries.txt
gemtc/tests/data/dietfat.fe.summaries.txt
gemtc/tests/data/anohe-breaking.gemtc
gemtc/tests/data/cipriani-efficacy.summaries.txt
gemtc/tests/data/parkinson-diff.summaries.txt
gemtc/tests/data/luades-smoking.summaries.txt
gemtc/tests/data/welton-diastolic.gemtc
gemtc/tests/data/parkinson.summaries.txt
gemtc/tests/data/welton-systolic.gemtc
gemtc/tests/data/welton-systolic.summaries.txt
gemtc/tests/test.R
gemtc/tests/testthat
gemtc/tests/testthat/test-unit-read.mtc.network.R
gemtc/tests/testthat/test-unit-inits.to.monitors.R
gemtc/tests/testthat/test-unit-arrayize.R
gemtc/tests/testthat/test-regress-anohe.R
gemtc/tests/testthat/test-unit-template.R
gemtc/tests/testthat/test-validate-welton-diastolic.R
gemtc/tests/testthat/test-unit-minimum.diameter.spanning.tree.R
gemtc/tests/testthat/test-unit-mtc.model_duparm.R
gemtc/tests/testthat/test-unit-ll.binom.logit.R
gemtc/tests/testthat/test-unit-regression.R
gemtc/tests/testthat/test-validate-parkinson-diff.R
gemtc/tests/testthat/test-unit-mtc.model.ume.R
gemtc/tests/testthat/test-validate-parkinson-shared.R
gemtc/tests/testthat/test-validate-riskratio.R
gemtc/tests/testthat/test-unit-mtc.model.use.R
gemtc/tests/testthat/test-unit-mtc.model_inits.R
gemtc/tests/testthat/helper-validate.R
gemtc/tests/testthat/test-unit-mtc.model.graph.R
gemtc/tests/testthat/test-unit-ll.binom.log.R
gemtc/tests/testthat/test-validate-welton-systolic.R
gemtc/tests/testthat/test-validate-dietfat-fe.R
gemtc/tests/testthat/test-validate-diabetes-surv-fe.R
gemtc/tests/testthat/helper-regress.R
gemtc/tests/testthat/test-unit-ll.poisson.log.R
gemtc/tests/testthat/test-unit-mtc.nr.comparisons.R
gemtc/tests/testthat/test-unit-ll.R
gemtc/tests/testthat/test-regress-models.R
gemtc/tests/testthat/test-unit-mtc.network_data.re.R
gemtc/tests/testthat/test-validate-diabetes-surv.R
gemtc/tests/testthat/test-validate-luades-smoking.R
gemtc/tests/testthat/test-validate-dietfat-re.R
gemtc/tests/testthat/test-unit-nodesplit.R
gemtc/tests/testthat/test-unit-has.indirect.evidence.R
gemtc/tests/testthat/test-validate-smoking-ume.R
gemtc/tests/testthat/test-validate-luades-thrombolytic.R
gemtc/tests/testthat/test-unit-decompose.R
gemtc/tests/testthat/test-unit-mtc.model_data.R
gemtc/tests/testthat/test-unit-mtc.hy.prior.R
gemtc/tests/testthat/test-unit-mtc.study.treatment.matrix.R
gemtc/tests/testthat/test-unit-mtc.model.nodesplit.R
gemtc/tests/testthat/test-unit-allpairs.R
gemtc/tests/testthat/test-unit-relative.effect.R
gemtc/tests/testthat/test-validate-welton-cholesterol.R
gemtc/tests/testthat/test-validate-cipriani-efficacy.R
gemtc/tests/testthat/test-validate-parkinson.R
gemtc/tests/testthat/test-unit-mtc.model_columns.R
gemtc/tests/testthat/test-unit-mtc.model.consistency.R
gemtc/tests/testthat/test-unit-relative.effect.table.R
gemtc/tests/testthat/test-unit-studyrow.R
gemtc/src
gemtc/src/Makevars
gemtc/src/rank.c
gemtc/NAMESPACE
gemtc/NEWS
gemtc/data
gemtc/data/smoking.rdata
gemtc/data/depression.rdata
gemtc/data/dietfat.rdata
gemtc/data/certolizumab.rdata
gemtc/data/parkinson-diff.rdata
gemtc/data/hfPrevention.rdata
gemtc/data/parkinson-shared.rdata
gemtc/data/atrialFibrillation.rdata
gemtc/data/parkinson.rdata
gemtc/data/thrombolytic.rdata
gemtc/data/blocker.rdata
gemtc/R
gemtc/R/inits.R gemtc/R/mtc.model.regression.R gemtc/R/mtc.model.nodesplit.R gemtc/R/mtc.data.studyrow.R gemtc/R/regression.R gemtc/R/arrayize.R gemtc/R/priors.R gemtc/R/anohe.R gemtc/R/mtc.model.consistency.R gemtc/R/stopIfNotConsistent.R gemtc/R/mtc.model.R gemtc/R/nodesplit.R gemtc/R/data.R gemtc/R/solveLP.R gemtc/R/template.R gemtc/R/code.R gemtc/R/mtc.model.use.R gemtc/R/ll-helper.counts.R gemtc/R/relative.effect.R gemtc/R/rank.probability.R gemtc/R/ll.call.R gemtc/R/likelihoods.R gemtc/R/mtc.network.xml.R gemtc/R/deviance.R gemtc/R/mtc.network.R gemtc/R/mtc.run.R gemtc/R/ll.binom.log.R gemtc/R/ll.poisson.log.R gemtc/R/mtc.hy.prior.R gemtc/R/ll.binom.logit.R gemtc/R/relative.effect.table.R gemtc/R/mtc.result.R gemtc/R/mtc.model.ume.R gemtc/R/blobbogram.R gemtc/R/ll.normal.identity.R gemtc/R/plotCovariateEffect.R gemtc/R/minimum.diameter.spanning.tree.R gemtc/R/ll.binom.cloglog.R gemtc/R/forest.R
gemtc/MD5
gemtc/DESCRIPTION
gemtc/man
gemtc/man/rank.probability.Rd
gemtc/man/figures
gemtc/man/figures/parkinson.png
gemtc/man/figures/parkinson.pdf
gemtc/man/thrombolytic.Rd gemtc/man/hfPrevention.Rd gemtc/man/mtc.deviance.Rd gemtc/man/mtc.run.Rd gemtc/man/mtc.nodesplit.Rd gemtc/man/mtc.anohe.Rd gemtc/man/dietfat.Rd gemtc/man/blocker.Rd gemtc/man/read.mtc.network.Rd gemtc/man/mtc.network.Rd gemtc/man/ll.call.Rd gemtc/man/mtc.hy.prior.Rd gemtc/man/relative.effect.table.Rd gemtc/man/depression.Rd gemtc/man/certolizumab.Rd gemtc/man/gemtc-package.Rd gemtc/man/mtc.model.Rd gemtc/man/smoking.Rd gemtc/man/atrialFibrillation.Rd gemtc/man/mtc.data.studyrow.Rd gemtc/man/relative.effect.Rd gemtc/man/blobbogram.Rd gemtc/man/parkinson.Rd gemtc/man/plotCovariateEffect.Rd

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