Description Usage Arguments Details Value Note Author(s) References See Also Examples
Plot values of markers(SNPs, expression, genes, RNA,...) for all chromosomes.
1 | genomeplot(data, select)
|
data |
The data are to be used.Each row of the table appears as one line of the file. If it does not contain an absolute path, the file name is relative to the current working directory, getwd(). Tilde-expansion is performed where supported. This can be a compressed file. |
select |
integer: the number of colour schemes which you will choose for the graphic. |
The data to be read will contain four columes,which are cgID,chromosome number,the position,the values.
return the graphic.
return the graphic.
Jing Xu and Yongshuai Jiang
2016 tutorial
1 2 3 | data(sample_data)
select <- 1
genomeplot(sample_data,select)
|
Loading required package: ggplot2
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