genomic.autocorr: Models Dealing with Spatial Dependency in Genomic Data

Local structure in genomic data often induces dependence between observations taken at different genomic locations. Ignoring this dependence leads to underestimation of the standard error of parameter estimates. This package uses block bootstrapping to estimate asymptotically correct standard errors of parameters from any standard generalised linear model that may be fit by the glm() function.

Getting started

Package details

AuthorChris Wallace [aut, cre], Oliver Burren [aut]
MaintainerChris Wallace <cew54@cam.ac.uk>
LicenseGPL-2
Version1.0-1
URL https://github.com/chr1swallace/genomic.autocorr
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("genomic.autocorr")

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genomic.autocorr documentation built on May 1, 2019, 8:48 p.m.