geotopbricks: An R Plug-in for the Distributed Hydrological Model GEOtop

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It analyzes raster maps and other information as input/output files from the Hydrological Distributed Model GEOtop. It contains functions and methods to import maps and other keywords from geotop.inpts file. Some examples with simulation cases of GEOtop 2.0 are presented in the package. Any information about the GEOtop Distributed Hydrological Model source code is available on https://github.com/geotopmodel or https://github.com/se27xx/GEOtop. Technical details about the model are available in Endrizzi et al, 2014 (http://www.geosci-model-dev.net/7/2831/2014/gmd-7-2831-2014.html).

Author
Emanuele Cordano, Daniele Andreis, Fabio Zottele
Date of publication
2016-07-07 17:37:40
Maintainer
Emanuele Cordano <emanuele.cordano@gmail.com>
License
GPL (>= 2)
Version
1.4
URLs

View on CRAN

Man pages

argsParser
Parser of an argument string
bondone
Bondone Dataset
brick.decimal.formatter
Imports a brick of raster ascii maps into a 'brick' object
brickFromOutputSoil3DTensor
brickFromOutputSoil3DTensor
brick-methods
brick
color.bar
Graphic Representation of a Color bar, function written by...
color.bar.raster
Graphic Representation of a Color legend of a Raster or...
create.geotop.inpts.keyword
Creates an 'geotop.inpts' files the keyword and their values...
create.geotop.meteo.files
Creates geotop meteo files from (a list of) 'zoo' objects
declared.geotop.inpts.keywords
Collects all keywords contained in the 'getop.inpts'...
geotopbrick
geotopbrick
GeotopRasterBrick-class
GeotopRasterBrick-class
get.geotop.inpts.keyword.value
Importing a GEOtop Keyword and its Value into R
get.geotop.recovery.state
This function saves all spatially distrubuted information...
getProjection
It reads the CRS metadata utilzed in a GEOtop Simulation
getvalues.brick.at.depth
Interpolates the values of a 'brick' at a certain depth and...
KML-methods
KML
listFromOutputSoil3DTensor
Extracts a list of files pointing to an output 3D Tensor or...
max_value
max_value
min_value
min_value
Ops-methods
Ops
plot-methods
plot
pointer.to.maps.xyz.time
pointer.to.maps.xyz.time
read.ascii.vectorized.brick
Read a text file containing values and matedata of a z-layer...
read.raster.from.url
It imports a 'RasterLayer' object in Escri-Asci format from a...
read.vectorized.geotop.recovery
Reads a text file like the one generated by...
replace.keyword
It replaces some keyword values of 'geotop.inpts' file with...
set.geotop.recovery.state
This function re-writes the recovery ascii raster maps in a...
vertical.aggregate.brick.within.depth
Aggregates with a mean or an addition on the vertical profile...
write.ascii.vectorized.brick
Writes a z-layer brick referred to a time instant (e.g. date)...
write.geotop.table
Writes an R object ('data.frame' or 'zoo') into a CSV file...
writeRasterxGEOtop
This function uses 'writeRaster' to create .asc maps which...
write.vectorized.geotop.recovery
It writes a 'list' object returened by...
write.vectorized.variable.in.string
Writes one or more variables (scalars, vectors or Rasters) in...
zoo-class
A GeotopRasterBrick: an object to manage raster maps provied...

Files in this package

geotopbricks
geotopbricks/inst
geotopbricks/inst/geotopbricks-manual.pdf
geotopbricks/inst/regression-testing
geotopbricks/inst/regression-testing/geotop-test-1D.R
geotopbricks/inst/regression-testing/test-1D.txt
geotopbricks/inst/doc
geotopbricks/inst/doc/examples
geotopbricks/inst/doc/examples/example.geotopmeteostation.R
geotopbricks/inst/doc/examples/SoilLiqContentTensorFile_2002-03-22.kmz
geotopbricks/inst/doc/examples/example.KML.GeotopRasterBrick.R
geotopbricks/inst/doc/examples/zz_wtc_33cm_ton_toss.kmz
geotopbricks/inst/doc/examples/snowthickness
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0005.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0002.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0001.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0009.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0006.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0007.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0010.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0012.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0004.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0008.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0003.asc
geotopbricks/inst/doc/examples/snowthickness/SnowThickness0000L0011.asc
geotopbricks/inst/doc/examples/example.vertical.aggregate.brick.within.depth.R
geotopbricks/inst/doc/examples/example.time.aggragation.R
geotopbricks/inst/doc/examples/snowthickness_textfile
geotopbricks/inst/doc/examples/snowthickness_textfile/template.txt
geotopbricks/inst/doc/examples/snowthickness_textfile/template_matlab.txt
geotopbricks/inst/doc/examples/snowthickness_textfile/snowthickness.txt
geotopbricks/inst/doc/examples/zz_wtc_33cm_ton_toss_legend.pdf
geotopbricks/inst/doc/examples/meteopoint.kml
geotopbricks/inst/doc/examples/example.getvalues.brick.at.depth.R
geotopbricks/inst/doc/examples/test.examples.R
geotopbricks/inst/doc/examples/example.brickFromOutput3DTensor.R
geotopbricks/inst/doc/examples/example.plot.GeotopRasterBrick.R
geotopbricks/inst/doc/README.txt
geotopbricks/inst/template
geotopbricks/inst/template/friuli
geotopbricks/inst/template/friuli/mio_hnw_2d_log.txt
geotopbricks/inst/template/friuli/_SUCCESSFUL_RUN.old
geotopbricks/inst/template/friuli/rec
geotopbricks/inst/template/friuli/rec/SoilPressure0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowThickness0000L0005.asc
geotopbricks/inst/template/friuli/rec/RainOnCanopy0000.asc
geotopbricks/inst/template/friuli/rec/SnowLiqWaterContent0000L0005.asc
geotopbricks/inst/template/friuli/rec/SnowTemperature0000L0004.asc
geotopbricks/inst/template/friuli/rec/SnowThickness0000L0002.asc
geotopbricks/inst/template/friuli/rec/SnowIceContent0000L0002.asc
geotopbricks/inst/template/friuli/rec/SoilIceContent0000L0002.asc
geotopbricks/inst/template/friuli/rec/SnowAge0000.asc
geotopbricks/inst/template/friuli/rec/VegTemperature0000.asc
geotopbricks/inst/template/friuli/rec/SnowThickness0000L0001.asc
geotopbricks/inst/template/friuli/rec/SoilChannelTemperature0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowLiqWaterContent0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowLiqWaterContent0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowTemperature0000L0002.asc
geotopbricks/inst/template/friuli/rec/SnowLiqWaterContent0000L0002.asc
geotopbricks/inst/template/friuli/rec/SoilChannelTemperature0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowOnCanopy0000.asc
geotopbricks/inst/template/friuli/rec/SoilPressure0000L0002.asc
geotopbricks/inst/template/friuli/rec/SoilChannelIceContent0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowTemperature0000L0001.asc
geotopbricks/inst/template/friuli/rec/SoilPressure0000L0003.asc
geotopbricks/inst/template/friuli/rec/SoilTemperature0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowTemperature0000L0005.asc
geotopbricks/inst/template/friuli/rec/SoilChannelIceContent0000L0002.asc
geotopbricks/inst/template/friuli/rec/SuccessfulRecovery
geotopbricks/inst/template/friuli/rec/SuccessfulRecovery.old
geotopbricks/inst/template/friuli/rec/SoilChannelIceContent0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowIceContent0000L0005.asc
geotopbricks/inst/template/friuli/rec/SnowTemperature0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowLayersNumber0000.asc
geotopbricks/inst/template/friuli/rec/SnowThickness0000L0004.asc
geotopbricks/inst/template/friuli/rec/SoilChannelPressure0000L0000.asc
geotopbricks/inst/template/friuli/rec/README.txt
geotopbricks/inst/template/friuli/rec/RecoveryTime.txt
geotopbricks/inst/template/friuli/rec/SoilIceContent0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowIceContent0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowIceContent0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowThickness0000L0003.asc
geotopbricks/inst/template/friuli/rec/SoilChannelPressure0000L0002.asc
geotopbricks/inst/template/friuli/rec/SoilChannelTemperature0000L0002.asc
geotopbricks/inst/template/friuli/rec/SoilPressure0000L0000.asc
geotopbricks/inst/template/friuli/rec/SoilTemperature0000L0002.asc
geotopbricks/inst/template/friuli/rec/SoilTemperature0000L0003.asc
geotopbricks/inst/template/friuli/rec/SnowIceContent0000L0004.asc
geotopbricks/inst/template/friuli/rec/SoilChannelPressure0000L0003.asc
geotopbricks/inst/template/friuli/rec/SoilIceContent0000L0001.asc
geotopbricks/inst/template/friuli/rec/SnowLiqWaterContent0000L0004.asc
geotopbricks/inst/template/friuli/rec/SoilChannelPressure0000L0001.asc
geotopbricks/inst/template/friuli/output_tabs
geotopbricks/inst/template/friuli/output_tabs/point_info_0005.txt
geotopbricks/inst/template/friuli/output_tabs/point_info_0001.txt
geotopbricks/inst/template/friuli/output_tabs/point_info_0003.txt
geotopbricks/inst/template/friuli/output_tabs/README.txt
geotopbricks/inst/template/friuli/output_tabs/point_info_0002.txt
geotopbricks/inst/template/friuli/output_tabs/point_info_0004.txt
geotopbricks/inst/template/friuli/ListPoints.txt
geotopbricks/inst/template/friuli/geotop.log
geotopbricks/inst/template/friuli/geotop.inpts
geotopbricks/inst/template/friuli/input_maps_250m
geotopbricks/inst/template/friuli/input_maps_250m/dem.asc
geotopbricks/inst/template/friuli/input_maps_250m/soiltype.asc
geotopbricks/inst/template/friuli/input_maps_250m/aspect.asc
geotopbricks/inst/template/friuli/input_maps_250m/sky.asc
geotopbricks/inst/template/friuli/input_maps_250m/slope.asc
geotopbricks/inst/template/friuli/input_maps_250m/landcover.asc
geotopbricks/inst/template/friuli/horizon_meteo
geotopbricks/inst/template/friuli/horizon_meteo/horizon0005.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0009.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0006.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0002.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0001.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0011.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0008.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0010.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0004.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0007.txt
geotopbricks/inst/template/friuli/horizon_meteo/horizon0003.txt
geotopbricks/inst/template/friuli/_SUCCESSFUL_RUN
geotopbricks/inst/template/friuli/horizon_point
geotopbricks/inst/template/friuli/horizon_point/horizon0005.txt
geotopbricks/inst/template/friuli/horizon_point/horizon0002.txt
geotopbricks/inst/template/friuli/horizon_point/horizon0001.txt
geotopbricks/inst/template/friuli/horizon_point/horizon0004.txt
geotopbricks/inst/template/friuli/horizon_point/horizon0003.txt
geotopbricks/inst/template/friuli/soil
geotopbricks/inst/template/friuli/soil/soil0001.txt
geotopbricks/inst/template/friuli/io_it.ini
geotopbricks/inst/template/friuli/mio_TA_2d_log.txt
geotopbricks/inst/template/meteo_ex
geotopbricks/inst/template/meteo_ex/meteo.inpts
geotopbricks/inst/template/meteo_ex/geotop.inpts.original
geotopbricks/inst/template/meteo_ex/geotop.inpts
geotopbricks/inst/template/example.geotop.recovery.state.R
geotopbricks/inst/rendena100
geotopbricks/inst/rendena100/SnowDepthMapFile-2014-MA-mean-winter-2013-2014.prj
geotopbricks/inst/rendena100/SnowDepthMapFile-2014-MA-mean-winter-2013-2014.asc
geotopbricks/NAMESPACE
geotopbricks/data
geotopbricks/data/bondone.rda
geotopbricks/data/datalist
geotopbricks/R
geotopbricks/R/pointer.to.2Dmaps.R
geotopbricks/R/get.recovery.state.R
geotopbricks/R/plot.GeotopRasterBrick.R
geotopbricks/R/write.geotop.table.R
geotopbricks/R/min_value.R
geotopbricks/R/argsParser.R
geotopbricks/R/write.vectorized.variable.in.string.R
geotopbricks/R/replace.keyword.v0.R
geotopbricks/R/read.raster.from.asc.url.R
geotopbricks/R/getvalues.brick.at.depth.R
geotopbricks/R/max_value.R
geotopbricks/R/write.vectorized.geotop.recovery.R
geotopbricks/R/create.geotop.meteo.file.R
geotopbricks/R/geotopbrick_S3.R
geotopbricks/R/getProjection.R
geotopbricks/R/ops.GeotopRasterBrick.R
geotopbricks/R/brick.decimal.formatter.R
geotopbricks/R/aggregate.brick.at.depth.R
geotopbricks/R/listFromOutput3DTensor.R
geotopbricks/R/write.ascii.vectorizrerd.brick.R
geotopbricks/R/bar.color.R
geotopbricks/R/brick.GeotopRasterBrick.R
geotopbricks/R/brickFromOutput3DTensor.R
geotopbricks/R/get.keyword.value.R
geotopbricks/R/set.recovery.state.R
geotopbricks/R/declared.geotop.inpts.keywords.R
geotopbricks/R/KML.GeotopRasterBrick.R
geotopbricks/R/writeRasterxgeotop.R
geotopbricks/R/read.ascii.vectorized.brick.R
geotopbricks/R/read.vectorized.geotop.recovery.R
geotopbricks/R/bar.color.raster.R
geotopbricks/R/AAAClasses.R
geotopbricks/R/create.geotop.inpts.keywords.R
geotopbricks/README.md
geotopbricks/MD5
geotopbricks/DESCRIPTION
geotopbricks/man
geotopbricks/man/KML-methods.Rd
geotopbricks/man/color.bar.raster.Rd
geotopbricks/man/color.bar.Rd
geotopbricks/man/min_value.Rd
geotopbricks/man/writeRasterxGEOtop.Rd
geotopbricks/man/Ops-methods.Rd
geotopbricks/man/write.vectorized.variable.in.string.Rd
geotopbricks/man/getProjection.Rd
geotopbricks/man/plot-methods.Rd
geotopbricks/man/GeotopRasterBrick-class.Rd
geotopbricks/man/create.geotop.inpts.keyword.Rd
geotopbricks/man/write.ascii.vectorized.brick.Rd
geotopbricks/man/argsParser.Rd
geotopbricks/man/write.vectorized.geotop.recovery.Rd
geotopbricks/man/get.geotop.inpts.keyword.value.Rd
geotopbricks/man/get.geotop.recovery.state.Rd
geotopbricks/man/pointer.to.maps.xyz.time.Rd
geotopbricks/man/zoo-class.Rd
geotopbricks/man/set.geotop.recovery.state.Rd
geotopbricks/man/getvalues.brick.at.depth.Rd
geotopbricks/man/replace.keyword.Rd
geotopbricks/man/read.raster.from.url.Rd
geotopbricks/man/create.geotop.meteo.files.Rd
geotopbricks/man/declared.geotop.inpts.keywords.Rd
geotopbricks/man/bondone.Rd
geotopbricks/man/geotopbrick.Rd
geotopbricks/man/brick.decimal.formatter.Rd
geotopbricks/man/brick-methods.Rd
geotopbricks/man/max_value.Rd
geotopbricks/man/read.ascii.vectorized.brick.Rd
geotopbricks/man/vertical.aggregate.brick.within.depth.Rd
geotopbricks/man/read.vectorized.geotop.recovery.Rd
geotopbricks/man/listFromOutputSoil3DTensor.Rd
geotopbricks/man/write.geotop.table.Rd
geotopbricks/man/brickFromOutputSoil3DTensor.Rd