ggcoverage: Visualize Genome Coverage with Various Annotations

The goal of 'ggcoverage' is to simplify the process of visualizing genome coverage. It contains functions to load data from BAM, BigWig or BedGraph files, create genome coverage plot, add various annotations to the coverage plot, including base and amino acid annotation, GC annotation, gene annotation, transcript annotation, ideogram annotation and peak annotation.

Getting started

Package details

AuthorYabing Song [aut, cre]
MaintainerYabing Song <songyb0519@gmail.com>
LicenseMIT + file LICENSE
Version0.7.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("ggcoverage")

Try the ggcoverage package in your browser

Any scripts or data that you put into this service are public.

ggcoverage documentation built on Sept. 6, 2022, 9:06 a.m.