geom_half_dotplot: Half dot plot with sensible parameter settings.

In gghalves: Compose Half-Half Plots Using Your Favourite Geoms

Half dot plot with sensible parameter settings.

Description

In a dot plot, the width of a dot corresponds to the bin width (or maximum width, depending on the binning algorithm), and dots are stacked, with each dot representing one observation.

Usage

geom_half_dotplot(
  mapping = NULL,
  data = NULL,
  position = "dodge",
  ...,
  binwidth = NULL,
  binaxis = "y",
  method = "dotdensity",
  binpositions = "bygroup",
  stackdir = "up",
  stackratio = 1,
  dotsize = 1,
  stackgroups = FALSE,
  origin = NULL,
  right = TRUE,
  width = NULL,
  drop = FALSE,
  na.rm = FALSE,
  show.legend = NA,
  inherit.aes = TRUE
)

Arguments

mapping	Set of aesthetic mappings created by aes() or aes_(). If specified and inherit.aes = TRUE (the default), it is combined with the default mapping at the top level of the plot. You must supply mapping if there is no plot mapping.
data	The data to be displayed in this layer. There are three options: If NULL, the default, the data is inherited from the plot data as specified in the call to ggplot(). A data.frame, or other object, will override the plot data. All objects will be fortified to produce a data frame. See fortify() for which variables will be created. A function will be called with a single argument, the plot data. The return value must be a data.frame, and will be used as the layer data. A function can be created from a formula (e.g. ~ head(.x, 10)).
position	Position adjustment, either as a string, or the result of a call to a position adjustment function.
...	Other arguments passed on to layer(). These are often aesthetics, used to set an aesthetic to a fixed value, like colour = "red" or size = 3. They may also be parameters to the paired geom/stat.
binwidth	When method is "dotdensity", this specifies maximum bin width. When method is "histodot", this specifies bin width. Defaults to 1/30 of the range of the data
binaxis	The axis to bin along, "x" (default) or "y"
method	"dotdensity" (default) for dot-density binning, or "histodot" for fixed bin widths (like stat_bin)
binpositions	When method is "dotdensity", "bygroup" (default) determines positions of the bins for each group separately. "all" determines positions of the bins with all the data taken together; this is used for aligning dot stacks across multiple groups.
stackdir	Which direction to stack the dots. "up" (default) places the half-dotplot on the right side. "down" on the left side.
stackratio	how close to stack the dots. Default is 1, where dots just touch. Use smaller values for closer, overlapping dots.
dotsize	The diameter of the dots relative to binwidth, default 1.
stackgroups	should dots be stacked across groups? This has the effect that position = "stack" should have, but can't (because this geom has some odd properties).
origin	When method is "histodot", origin of first bin
right	When method is "histodot", should intervals be closed on the right (a, b], or not [a, b)
width	When binaxis is "y", the spacing of the dot stacks for dodging.
drop	If TRUE, remove all bins with zero counts
na.rm	If FALSE, the default, missing values are removed with a warning. If TRUE, missing values are silently removed.
show.legend	logical. Should this layer be included in the legends? NA, the default, includes if any aesthetics are mapped. FALSE never includes, and TRUE always includes. It can also be a named logical vector to finely select the aesthetics to display.
inherit.aes	If FALSE, overrides the default aesthetics, rather than combining with them. This is most useful for helper functions that define both data and aesthetics and shouldn't inherit behaviour from the default plot specification, e.g. borders().

Details

There are two basic approaches: dot-density and histodot. With dot-density binning, the bin positions are determined by the data and 'binwidth', which is the maximum width of each bin. See Wilkinson (1999) for details on the dot-density binning algorithm. With histodot binning, the bins have fixed positions and fixed widths, much like a histogram.

When binning along the x axis and stacking along the y axis, the numbers on y axis are not meaningful, due to technical limitations of ggplot2. You can hide the y axis, as in one of the examples, or manually scale it to match the number of dots.

Computed variables

x

center of each bin, if binaxis is "x"

y

center of each bin, if binaxis is "x"

binwidth

max width of each bin if method is "dotdensity"; width of each bin if method is "histodot"

count

number of points in bin

ncount

count, scaled to maximum of 1

density

density of points in bin, scaled to integrate to 1, if method is "histodot"

ndensity

density, scaled to maximum of 1, if method is "histodot"

References

Wilkinson, L. (1999) Dot plots. The American Statistician, 53(3), 276-281.

Examples

ggplot(iris, aes(x = Species, y = Petal.Width, fill = Species)) + 
  geom_half_dotplot(stackratio = .5, method = "histodot") 

gghalves documentation built on Nov. 20, 2022, 5:07 p.m.