getMotifFromMEME: Extract and Visualize Motif Information from MEME Software
In ggmotif: Extract and Visualize Motif Information from MEME Software

View source: R/getMotifFromMEME.R

getMotifFromMEME

R Documentation

Extract and Visualize Motif Information from MEME Software

Description

getMotifFromMEME Extract motif information from the MEME software results.

Arguments

`data`	A txt file from MEME software.
`format`	The result format from MEME, txt or xml.

Value

Return a datafram

Author(s)

Xiang LI <lixiang117423@foxmail.com>

Examples

filepath <- system.file("examples", "meme.txt", package = "ggmotif")
motif.info <- getMotifFromMEME(data = filepath, format = "txt")

filepath <- system.file("examples", "meme.xml", package = "ggmotif")
motif.info <- getMotifFromMEME(data = filepath, format = "xml")

ggmotif documentation built on Aug. 11, 2022, 5:11 p.m.