Man pages for ggpedigree
Visualizing Pedigrees with 'ggplot2' and 'plotly'
| addFocalFillColumn | Add Focal Fill Column to Pedigree Data |
| addTwins | Add Twins to ggplot Pedigree Plot |
| alignPedigreeWithHints | Align pedigree with hints for plotting This function aligns a... |
| alignPedigreeWithRelations | Align pedigree with additional relations |
| ASOIAF | A pedigree of ice and fire |
| buildPlotConfig | build Config |
| buildSpouseSegments | Build spouse segments |
| calculateConnections | Calculate connections for a pedigree dataset |
| calculateCoordinates | Calculate coordinates for plotting individuals in a pedigree |
| computeDistance | Compute distance between two points |
| countOffspring | Count offspring of each individual |
| countSiblings | Count siblings of each individual |
| createFillColumn | Get fill column for ggPedigree |
| dot-addAnnotate | Add annotates to ggplot Pedigree Plot |
| dot-addLabels | Add Labels to ggplot Pedigree Plot |
| dot-addNodes | Add Nodes to ggplot Pedigree Plot |
| dot-addOverlay | Add Overlay to ggplot Pedigree Plot |
| dot-addScales | Add Scales to ggplot Pedigree Plot |
| dot-addSelfSegment | Add Self Segments to ggplot Pedigree Plot |
| dot-adjustSpacing | Adjust spacing in ggPedigree coordinate columns |
| dot-computeCurvedMidpoint | Compute point along a curved segment (quadratic Bézier) |
| dot-makeSymmetricKey | Generate a symmetric key for two IDs |
| dot-preparePhenotypeByDegreeData | Prepare data for ggPhenotypeByDegree This function prepares... |
| dot-restoreNames | Restore user-specified column names in a connections data... |
| formatTooltip | Format tooltip text |
| generateSpouseList | Generate a spouselist matrix |
| getDefaultPlotConfig | Shared Default Plotting Configuration |
| getMidpoints | Compute midpoints across grouped coordinates |
| getRelativeCoordinates | Get coordinate positions of relatives for each individual |
| ggPedigree | Plot a custom pedigree diagram |
| ggPedigree.core | Core Function for ggPedigree |
| ggPedigreeInteractive | Interactive pedigree plot (Plotly wrapper around ggPedigree) |
| ggpedigree-package | ggpedigree: Visualizing Pedigrees with 'ggplot2' and 'plotly' |
| ggPhenotypeByDegree | Plot correlation of genetic relatedness by phenotype |
| ggPhenotypeByDegree.core | Core plotting function for ggPhenotypeByDegree This function... |
| ggRelatednessMatrix | Plot a relatedness matrix as a heatmap (ggpedigree style) |
| ggRelatednessMatrix.core | Core Function for ggRelatednessMatrix |
| optimizePedigree | Optimize Pedigree Plot |
| optimizePlotlyPedigree | Optimize Plotly Pedigree Plot |
| optimizeStaticPedigree | Optimize Static Pedigree Plot |
| plotPedigree | plotPedigree A wrapped function to plot simulated pedigree... |
| preparePedigreeData | Prepare Pedigree Data |
| processExtras | Process duplicate appearances of individuals in a pedigree... |
| redsquirrels | Kluane Red Squirrel Data |
| transformPed | Process Pedigree Data |
