Man pages for ggseg.formats
Brain Atlas Data Structures for the 'ggsegverse' Ecosystem
| aseg | FreeSurfer Automatic Subcortical Segmentation Atlas |
| as_ggseg_atlas | Coerce to ggseg atlas |
| as_polygon_atlas | Convert a ggseg atlas to the sf-optional polygon... |
| as_sf_atlas | Rehydrate a ggseg atlas into sf-backed form |
| atlas_geom | Get the raw 2D geometry of an atlas |
| atlas_geometry_type | Classify or test an atlas's 2D geometry |
| atlas_labels | Extract unique labels from an atlas |
| atlas_manipulation | Manipulate brain atlas regions and views |
| atlas_meshes | Get atlas meshes for 3D rendering |
| atlas_palette | Get atlas palette |
| atlas_polygons | Get atlas polygons for 2D rendering |
| atlas_regions | Extract unique region names from an atlas |
| atlas_sf | Get atlas data for 2D rendering |
| atlas_type | Detect atlas type |
| atlas_vertices | Get atlas vertices for 3D rendering |
| atlas_views | Get available views in atlas |
| convert_legacy_brain_atlas | Convert legacy ggseg atlases to ggseg_atlas format |
| dk | Desikan-Killiany Cortical Atlas |
| get_brain_mesh | Get brain surface mesh |
| get_cerebellar_mesh | Get SUIT cerebellar surface mesh |
| ggseg_atlas | Constructor for ggseg atlas |
| ggseg_data_cerebellar | Create cerebellar atlas data |
| ggseg_data_cortical | Create cortical atlas data |
| ggseg_data_subcortical | Create subcortical atlas data |
| ggseg_data_tract | Create tract atlas data |
| ggseg.formats-package | ggseg.formats: Brain Atlas Data Structures for the... |
| is_ggseg3d_atlas | Check if object is a legacy ggseg3d atlas |
| is_ggseg_atlas | Check ggseg atlas class |
| migrate_atlas_files | Migrate atlas '.rda' files to the sf-optional polygon format |
| polygons_to_sf | Convert sf-optional polygons to an sf data frame |
| read_atlas_files | Read in atlas data from all subjects |
| read_freesurfer_stats | Read in raw FreeSurfer stats file |
| read_freesurfer_table | Read in stats table from FreeSurfer |
| sf_to_polygons | Convert an sf atlas geometry to the sf-optional polygon... |
| suit | SUIT Cerebellar Lobular Atlas |
| tracula | TRACULA White Matter Tract Atlas |
