glmmGS: Gauss-Seidel Generalized Linear Mixed Model solver

Solve Generalized Linear Mixed Models using Gauss-Seidel algorithm

AuthorMichele Morara, Louise Ryan, Subharup Guha, Christopher Paciorek
Date of publication2014-01-05 12:25:00
MaintainerMichele Morara<moraram@battelle.org>
LicenseGPL
Version0.5-1
http://r-forge.r-project.org/projects/glmmgs/

View on CRAN

Files in this package

glmmGS
glmmGS/src
glmmGS/src/Makevars
glmmGS/src/GlmmGSRAPI.h
glmmGS/src/GlmmGS
glmmGS/src/GlmmGS/Responses
glmmGS/src/GlmmGS/Responses/BinomialResponse.cpp
glmmGS/src/GlmmGS/Responses/IResponse.cpp
glmmGS/src/GlmmGS/Responses/BinomialResponse.h
glmmGS/src/GlmmGS/Responses/PoissonlResponse.cpp
glmmGS/src/GlmmGS/Responses/PoissonResponse.h
glmmGS/src/GlmmGS/Responses/IResponse.h
glmmGS/src/GlmmGS/Variables
glmmGS/src/GlmmGS/Variables/IVariable.cpp
glmmGS/src/GlmmGS/Variables/Intercept.cpp
glmmGS/src/GlmmGS/Variables/WeakVectorVariable.h
glmmGS/src/GlmmGS/Variables/IVariable.h
glmmGS/src/GlmmGS/Variables/Intercept.h
glmmGS/src/GlmmGS/Offsets
glmmGS/src/GlmmGS/Offsets/ZeroOffset.h
glmmGS/src/GlmmGS/Offsets/IOffset.cpp
glmmGS/src/GlmmGS/Offsets/WeakVectorOffset.h
glmmGS/src/GlmmGS/Offsets/IOffset.h
glmmGS/src/GlmmGS/Offsets/ZeroOffset.cpp
glmmGS/src/GlmmGS/Estimate.h
glmmGS/src/GlmmGS/RandomEffects
glmmGS/src/GlmmGS/RandomEffects/Working
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Coefficients.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/IdentityModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/Functions.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/ICovarianceModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/IdentityModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/PrecisionModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/Functions.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/PrecisionModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/SparsePrecisionModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/SparsePrecisionModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/CovarianceModels/ICovarianceModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Block.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Boosters
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Boosters/Default.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Boosters/Default.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Boosters/RemoveMean.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Boosters/RemoveMean.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Boosters/IBooster.h
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Coefficients.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Stratified/Block.h
glmmGS/src/GlmmGS/RandomEffects/Working/IBlock.h
glmmGS/src/GlmmGS/RandomEffects/Working/IBlock.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Global
glmmGS/src/GlmmGS/RandomEffects/Working/Global/Coefficients.h
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels/IdentityModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels/ICovarianceModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels/IdentityModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels/PrecisionModel.h
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels/PrecisionModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Global/CovarianceModels/ICovarianceModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Global/Block.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Global/Coefficients.cpp
glmmGS/src/GlmmGS/RandomEffects/Working/Global/Block.h
glmmGS/src/GlmmGS/RandomEffects/Stratified
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/IdentityModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/ICovarianceModel.h
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/IdentityModel.h
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/PrecisionModel.h
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/PrecisionModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/SparsePrecisionModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/SparsePrecisionModel.h
glmmGS/src/GlmmGS/RandomEffects/Stratified/CovarianceModels/ICovarianceModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Stratified/Block.cpp
glmmGS/src/GlmmGS/RandomEffects/Stratified/Block.h
glmmGS/src/GlmmGS/RandomEffects/IBlock.h
glmmGS/src/GlmmGS/RandomEffects/IBlock.cpp
glmmGS/src/GlmmGS/RandomEffects/Global
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels/IdentityModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels/ICovarianceModel.h
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels/IdentityModel.h
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels/PrecisionModel.h
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels/PrecisionModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Global/CovarianceModels/ICovarianceModel.cpp
glmmGS/src/GlmmGS/RandomEffects/Global/Block.cpp
glmmGS/src/GlmmGS/RandomEffects/Global/Block.h
glmmGS/src/GlmmGS/GlmmGSSolver.cpp
glmmGS/src/GlmmGS/GlmmGS.h
glmmGS/src/GlmmGS/Controls.cpp
glmmGS/src/GlmmGS/Controls.h
glmmGS/src/GlmmGS/GlmmGS.cpp
glmmGS/src/GlmmGS/GlmmGSSolver.h
glmmGS/src/GlmmGS/FixedEffects
glmmGS/src/GlmmGS/FixedEffects/Working
glmmGS/src/GlmmGS/FixedEffects/Working/Stratified
glmmGS/src/GlmmGS/FixedEffects/Working/Stratified/Coefficients.h
glmmGS/src/GlmmGS/FixedEffects/Working/Stratified/Block.cpp
glmmGS/src/GlmmGS/FixedEffects/Working/Stratified/Coefficients.cpp
glmmGS/src/GlmmGS/FixedEffects/Working/Stratified/Block.h
glmmGS/src/GlmmGS/FixedEffects/Working/IBlock.h
glmmGS/src/GlmmGS/FixedEffects/Working/IBlock.cpp
glmmGS/src/GlmmGS/FixedEffects/Working/Global
glmmGS/src/GlmmGS/FixedEffects/Working/Global/Coefficients.h
glmmGS/src/GlmmGS/FixedEffects/Working/Global/Block.cpp
glmmGS/src/GlmmGS/FixedEffects/Working/Global/Coefficients.cpp
glmmGS/src/GlmmGS/FixedEffects/Working/Global/Block.h
glmmGS/src/GlmmGS/FixedEffects/Stratified
glmmGS/src/GlmmGS/FixedEffects/Stratified/Block.cpp
glmmGS/src/GlmmGS/FixedEffects/Stratified/Block.h
glmmGS/src/GlmmGS/FixedEffects/IBlock.h
glmmGS/src/GlmmGS/FixedEffects/IBlock.cpp
glmmGS/src/GlmmGS/FixedEffects/Global
glmmGS/src/GlmmGS/FixedEffects/Global/Block.cpp
glmmGS/src/GlmmGS/FixedEffects/Global/Block.h
glmmGS/src/GlmmGS/Standard.h
glmmGS/src/GlmmGS/Estimate.cpp
glmmGS/src/Utilities
glmmGS/src/Utilities/LinearAlgebra
glmmGS/src/Utilities/LinearAlgebra/LinearAlgebra.h
glmmGS/src/Utilities/LinearAlgebra/CholeskyDecomposition.h
glmmGS/src/Utilities/LinearAlgebra/MatrixFunctions.cpp
glmmGS/src/Utilities/LinearAlgebra/MatrixFunctions.h
glmmGS/src/Utilities/LinearAlgebra/VectorialCholeskyDecomposition.cpp
glmmGS/src/Utilities/LinearAlgebra/TriangularMatrixFunctions.h
glmmGS/src/Utilities/LinearAlgebra/TriangularMatrixFunctions.cpp
glmmGS/src/Utilities/LinearAlgebra/VectorFunctions.cpp
glmmGS/src/Utilities/LinearAlgebra/CholeskyDecomposition.cpp
glmmGS/src/Utilities/LinearAlgebra/VectorFunctions.h
glmmGS/src/Utilities/LinearAlgebra/VectorialCholeskyDecomposition.h
glmmGS/src/Utilities/Stack.h
glmmGS/src/Utilities/Container.h
glmmGS/src/Utilities/Pointer.h
glmmGS/src/Utilities/WeakFactor.h
glmmGS/src/Utilities/WeakFactor.cpp
glmmGS/src/Utilities/Comparer.h
glmmGS/src/Utilities/ReferenceCounter.h
glmmGS/src/Utilities/Matrix.h
glmmGS/src/Utilities/NewTypes
glmmGS/src/Utilities/NewTypes/Array.h
glmmGS/src/Utilities/NewTypes/Functions.cpp
glmmGS/src/Utilities/NewTypes/Matrix.h
glmmGS/src/Utilities/NewTypes/Globals.h
glmmGS/src/Utilities/NewTypes/Functions.h
glmmGS/src/Utilities/NewTypes/NewTypes.h
glmmGS/src/Utilities/NewTypes/ArrayCast.h
glmmGS/src/Utilities/NewTypes/Vector.h
glmmGS/src/Utilities/NewTypes/External.h
glmmGS/src/Utilities/NewTypes/Cast.h
glmmGS/src/Utilities/New.h
glmmGS/src/Utilities/Exceptions
glmmGS/src/Utilities/Exceptions/Exceptions.h
glmmGS/src/Utilities/Exceptions/InvalidOperationException.h
glmmGS/src/Utilities/Exceptions/MaxIterationsException.h
glmmGS/src/Utilities/Exceptions/Exception.h
glmmGS/src/Utilities/Exceptions/IntegerOverflowException.h
glmmGS/src/Utilities/Exceptions/StackUnderflowException.h
glmmGS/src/Utilities/Exceptions/Exception.cpp
glmmGS/src/Utilities/Exceptions/OutOfMemoryException.h
glmmGS/src/Utilities/Exceptions/InvalidArgumentException.h
glmmGS/src/Utilities/Exceptions/Assertions.h
glmmGS/src/Utilities/Exceptions/OverflowException.h
glmmGS/src/Utilities/Exceptions/NumericException.h
glmmGS/src/Utilities/Exceptions/RoundoffException.h
glmmGS/src/Utilities/ReferenceCounter.cpp
glmmGS/src/Utilities/WeakString.cpp
glmmGS/src/Utilities/Algorithms.h
glmmGS/src/Utilities/WeakMatrix.h
glmmGS/src/Utilities/Statistics
glmmGS/src/Utilities/Statistics/StatisticFunctions.cpp
glmmGS/src/Utilities/Statistics/StatisticFunctions.h
glmmGS/src/Utilities/TriangularMatrix.h
glmmGS/src/Utilities/IO
glmmGS/src/Utilities/IO/Print.h
glmmGS/src/Utilities/IO/BasicPrint.h
glmmGS/src/Utilities/IO/Stream.cpp
glmmGS/src/Utilities/IO/Stream.h
glmmGS/src/Utilities/IO/IO.h
glmmGS/src/Utilities/WeakString.h
glmmGS/src/Utilities/Comparer.cpp
glmmGS/src/Utilities/Allocator.h
glmmGS/src/Utilities/New.cpp
glmmGS/src/Utilities/LDL
glmmGS/src/Utilities/LDL/SparseCholeskyDecomposition.h
glmmGS/src/Utilities/LDL/LDL.h
glmmGS/src/Utilities/LDL/SparseCholeskyDecomposition.cpp
glmmGS/src/Utilities/LDL/Internal
glmmGS/src/Utilities/LDL/Internal/ldl.cpp
glmmGS/src/Utilities/LDL/Internal/amd_global.c
glmmGS/src/Utilities/LDL/Internal/amd_aat.c
glmmGS/src/Utilities/LDL/Internal/amd.h
glmmGS/src/Utilities/LDL/Internal/amd_info.c
glmmGS/src/Utilities/LDL/Internal/amd_internal.h
glmmGS/src/Utilities/LDL/Internal/amd_preprocess.c
glmmGS/src/Utilities/LDL/Internal/amd_postorder.c
glmmGS/src/Utilities/LDL/Internal/amd_control.c
glmmGS/src/Utilities/LDL/Internal/amd_order.c
glmmGS/src/Utilities/LDL/Internal/amd_dump.c
glmmGS/src/Utilities/LDL/Internal/amd_defaults.c
glmmGS/src/Utilities/LDL/Internal/amd_valid.c
glmmGS/src/Utilities/LDL/Internal/ldl.h
glmmGS/src/Utilities/LDL/Internal/UFconfig.h
glmmGS/src/Utilities/LDL/Internal/amd_1.c
glmmGS/src/Utilities/LDL/Internal/amd_2.c
glmmGS/src/Utilities/LDL/Internal/amd_post_tree.c
glmmGS/src/Utilities/LDL/SparseMatrix.h
glmmGS/src/Utilities/Buffer.cpp
glmmGS/src/Utilities/WeakVector.h
glmmGS/src/Utilities/Utilities.h
glmmGS/src/Utilities/Vector.h
glmmGS/src/Utilities/Buffer.h
glmmGS/src/Utilities/Math
glmmGS/src/Utilities/Math/Math.h
glmmGS/src/Utilities/Math/Math.cpp
glmmGS/src/Utilities/VectorAlgorithms.h
glmmGS/src/GlmmGSRAPI.cpp
glmmGS/src/GlmmGSAPI
glmmGS/src/GlmmGSAPI/GlmmGSAPI.cpp
glmmGS/src/GlmmGSAPI/GlmmGSAPI.h
glmmGS/src/GlmmGSAPI/Responses
glmmGS/src/GlmmGSAPI/Responses/BinomialResponseSection.h
glmmGS/src/GlmmGSAPI/Responses/BinomialResponseSection.cpp
glmmGS/src/GlmmGSAPI/Responses/PoissonResponseSection.h
glmmGS/src/GlmmGSAPI/Responses/PoissonResponseSection.cpp
glmmGS/src/GlmmGSAPI/Exceptions
glmmGS/src/GlmmGSAPI/Exceptions/Exceptions.h
glmmGS/src/GlmmGSAPI/RandomEffects
glmmGS/src/GlmmGSAPI/RandomEffects/RandomEffectsSection.cpp
glmmGS/src/GlmmGSAPI/RandomEffects/Stratified
glmmGS/src/GlmmGSAPI/RandomEffects/Stratified/BlockSection.cpp
glmmGS/src/GlmmGSAPI/RandomEffects/Stratified/BlockSection.h
glmmGS/src/GlmmGSAPI/RandomEffects/RandomEffectsSection.h
glmmGS/src/GlmmGSAPI/RandomEffects/Global
glmmGS/src/GlmmGSAPI/RandomEffects/Global/BlockSection.cpp
glmmGS/src/GlmmGSAPI/RandomEffects/Global/BlockSection.h
glmmGS/src/GlmmGSAPI/Section.h
glmmGS/src/GlmmGSAPI/FixedEffects
glmmGS/src/GlmmGSAPI/FixedEffects/FixedEffectsSection.cpp
glmmGS/src/GlmmGSAPI/FixedEffects/FixedEffectsSection.h
glmmGS/src/GlmmGSAPI/FixedEffects/Stratified
glmmGS/src/GlmmGSAPI/FixedEffects/Stratified/BlockSection.cpp
glmmGS/src/GlmmGSAPI/FixedEffects/Stratified/BlockSection.h
glmmGS/src/GlmmGSAPI/FixedEffects/Global
glmmGS/src/GlmmGSAPI/FixedEffects/Global/BlockSection.cpp
glmmGS/src/GlmmGSAPI/FixedEffects/Global/BlockSection.h
glmmGS/src/GlmmGSAPI/Section.cpp
glmmGS/src/GlmmGSAPI/Standard.h
glmmGS/NAMESPACE
glmmGS/R
glmmGS/R/glmmGSParser.R
glmmGS/R/glmmGS.R
glmmGS/R/zzz.R
glmmGS/R/glmmGSAPI.R
glmmGS/MD5
glmmGS/DESCRIPTION
glmmGS/man
glmmGS/man/glmmGS.SparseMatrix.Rd glmmGS/man/glmmGS.CovarianceModel.Rd glmmGS/man/glmmGS.Control.Rd glmmGS/man/glmmGS.Rd

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