Description Author(s) References Examples
preliminary analysis of similarity between samples in a low (2 or 3) dimensional display.
Michael B. Sohn
Maintainer: Michael B. Sohn <msohn@mail.med.upenn.edu>
Sohn, M.B. and Li, H. (2017). A GLM-Based Latent Variable Ordination Method for Microbiome Samples (Submitted).
1 2 3 4 5 6 7 8 9 10 11 12 13 14 | ## Not run:
# load test data
data(gomms_test_data);
# estimate factor scores
cdat <- as.matrix(gomms_test_data[,-ncol(gomms_test_data)]);
rslt <- gomms(cdat);
# plot estimated factor scores
y <- as.matrix(gomms_test_data$group);
gomms.plot(rslt, y);
## End(Not run)
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