phenotypeFile: Example Phenotype Data

In gpcp: Genomic Prediction of Cross Performance

Example Phenotype Data

Description

This is a sample phenotype dataset used for genomic prediction.

Usage

phenotypeFile

Format

A data frame with 24 columns:

ATW

Description of ATW

AUDPC_YAD

Area Under Disease Progress Curve for YAD

AUDPC_YMV

Area Under Disease Progress Curve for YMV

Accession

Genotype IDs for each individual

Block

Block information

DMC

Dry Matter Content values

Design

Experimental design

LOC

Location of the trials

NPH

Number of Plants Harvested

OXBI

Oxidation Index

Oxint180Minutes

Oxidation intensity after 180 minutes

PLOT

Plot number

REP

Replication number

Settweight

Weight of the planting setts

TTNPL

Total Tuber Number per Plant

TTWPL

Total Tuber Weight per Plant

Trial

Trial name or ID

Vigor

Plant vigor score

YIELD

Yield values

Year

Year of the experiment

Yield.per.plot..kg.

Yield per plot in kilograms

Yield_udj

Unadjusted Yield

rAUDPC_YAD

Relative AUDPC for YAD

rAUDPC_YMV

Relative AUDPC for YMV

Source

Generated for the gpcp package example

Examples

data(phenotypeFile)
head(phenotypeFile)

gpcp documentation built on April 12, 2025, 1:17 a.m.