report_gfdata: Download and Report 'GreenFeed' Data

In greenfeedr: Process and Report 'GreenFeed' Data

Download and Report 'GreenFeed' Data

Description

Generates a PDF report of preliminary and finalized 'GreenFeed' data. The report includes: number of animals using 'GreenFeed' and plots with distribution of records and gas production. If the preliminary option is used, the data is retrieved from the 'C-Lock Inc.' server through an 'API', otherwise the data processed by 'C-Lock Inc.' must be provided to generate the report.

Arguments

input_type	a character string representing type of data (options: "prelim" or "daily, and "final")
exp	a character string representing study name or other study identifier. It is used as file name to save the data
unit	numeric or character vector, or a list representing one or more 'GreenFeed' unit numbers
start_date	a character string representing the start date of the study (format: "dmy")
end_date	a character string representing the end date of the study (format: "dmy")
save_dir	a character string representing the directory to save the output file
plot_opt	a character string representing the gas(es) to plot (options: "All", "CH4", "CO2", "O2", "H2")
rfid_file	a character string representing the file with individual IDs. The order should be Visual ID (col1) and RFID (col2)
user	a character string representing the user name to logging into 'GreenFeed' system. If input_type is "final", this parameter is ignored
pass	a character string representing password to logging into 'GreenFeed' system. If input_type is "final", this parameter is ignored
file_path	A list of file paths containing the final report(s) from the 'GreenFeed' system. If input_type is "prelim", this parameter is ignored

Value

A CSV file with preliminary 'GreenFeed' data and a PDF report with a description of the preliminary or finalized data

Examples

# Please replace "your_username" and "your_password" with your actual 'GreenFeed' credentials.
# The data range must be fewer than 180 days
# Example without rfid_file (by default NA)

report_gfdata(
  user = "your_username",
  pass = "your_password",
  input_type = "prelim",
  exp = "StudyName",
  unit = 1,
  start_date = "2023-01-01",
  end_date = Sys.Date(),
  save_dir = tempdir(),
  plot_opt = "All"
)

greenfeedr documentation built on April 4, 2025, 12:22 a.m.