RepPop1: A simple example of a reppop table
In gscramble: Simulating Admixed Genotypes Without Replacement

RepPop1

R Documentation

A simple example of a reppop table

Description

A reppop table in 'gscramble' is used to define how the founder populations in a GSP (typically named something like "A", "B", etc.) are mapped to the groups/populations of individuals, as specified in the individual meta data (an example of which is found in I_meta).

Format

A tibble with three columns: index, which must be of type integer, pop, and group of type character.

Details

This particular version shows a situation where individuals from group Pop1 will be sampled as founders from A and from group Pop2 will be sampled as founders from B into the GSP. Since this RepPop1 example has two values of index: 1 and 2, it specifies that individuals from the populations will be sampled without replacment, two times into the founders on the pedigree.