haploR: Query 'HaploReg', 'RegulomeDB', 'LDlink'

A set of utilities for querying 'HaploReg' <http://archive.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <http://www.regulomedb.org>, and LDlink <https://analysistools.nci.nih.gov/LDlink> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' and 'LDlink', searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.

Package details

AuthorIlya Y. Zhbannikov [aut, cre], Konstantin G. Arbeev [aut], Anatoliy I. Yashin [aut]
MaintainerIlya Y. Zhbannikov <[email protected]>
LicenseGPL-3
Version2.0.6
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("haploR")

Try the haploR package in your browser

Any scripts or data that you put into this service are public.

haploR documentation built on Aug. 17, 2018, 5:03 p.m.