haploR: Query 'HaploReg', 'RegulomeDB', 'LDlink'

A set of utilities for querying 'HaploReg' <http://archive.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <http://www.regulomedb.org>, and LDlink <https://analysistools.nci.nih.gov/LDlink> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' and 'LDlink', searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.

Package details

AuthorIlya Y. Zhbannikov [aut, cre], Konstantin G. Arbeev [aut], Anatoliy I. Yashin [aut]
MaintainerIlya Y. Zhbannikov <[email protected]>
Package repositoryView on CRAN
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haploR documentation built on Jan. 19, 2019, 5:08 p.m.