haplotyper: haplotyper function identifies haplotypes within QTL.

In haplotyper: Tool for Clustering Genotypes in Haplotypes

Description

This function groups together all individuals of a population with the same haplotype.

Usage

haplotyper(x, Print = FALSE)

Arguments

x	a data.frame that should be loaded with read.table function. Each row represents the individuals while each column represents the markers. The first column contains the names of the genotypes.
Print	option for print the haplotyper result. The default is FALSE

Details

Each group contains individual with the same allele in each SNP, whether or not missing data.

Value

a matrix with the haplotypes

Author(s)

Sebastian Simondi, Victoria Bonnecarrere, Lucia Gutierrez, Gaston Quero

See Also

read.table function

Examples

## Not run: 
data(rice_qtl)
haplotyper(rice_qtl)

## End(Not run)

haplotyper documentation built on May 2, 2019, 6:05 a.m.