Based on hierarchical modeling, this package provides a few practical functions to find and present the optimal designs for a pooled NGS design.
|Author||Wei E. Liang|
|Date of publication||2012-06-01 14:26:57|
|Maintainer||Wei E. Liang <email@example.com>|
diffVariantError: differentiate a variant from sequencing error
FindOptPower: search for the optimal pooled design
hiPOD-package: hierarchial Pooled Optimal Design
ncp.pool.pred: prediction model of the non-centrality parameter from...
PlotOptPower: Plots a contour plot / 3d plot of the power of the potential...
predictPoolNCP: The prediction model of non-centrality parameter
probDetEqual3: Probability of Detection
ShowOptDesign: Print the top choices of designs
XmeanGivenCost: A function used to find best coverage given cost and other...