highTtest: Simultaneous Critical Values for t-Tests in Very High Dimensions
Version 1.1

Implements the method developed by Cao and Kosorok (2011) for the significance analysis of thousands of features in high-dimensional biological studies. It is an asymptotically valid data-driven procedure to find critical values for rejection regions controlling the k-familywise error rate, false discovery rate, and the tail probability of false discovery proportion.

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AuthorHongyuan Cao [aut], Michael Kosorok [aut], Shannon Holloway [aut, cre]
Date of publication2015-02-22 00:09:18
MaintainerShannon Holloway <sthollow@ncsu.edu>
LicenseGPL-2
Version1.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("highTtest")

Man pages

highTtest: Simultaneous critical values for t-tests in very high...
highTtest-class: Class '"highTtest"'
plot-methods: ~~ Methods for Function 'plot' ~~
vennD-methods: ~~ Methods for Function 'vennD' ~~

Functions

BH Man page
BH,highTtest Man page
BH,highTtest-method Man page
BenjaminiHochberg Source code
CK Man page
CK,highTtest Man page
CK,highTtest-method Man page
CaoKosorok Source code
ST Man page
ST,highTtest Man page
ST,highTtest-method Man page
StoreyTibshirani Source code
highTtest Man page Source code
highTtest-class Man page
pi_alt Man page
pi_alt,highTtest Man page
pi_alt,highTtest-method Man page
plot,ANY-method Man page
plot,highTtest Man page
plot,highTtest-method Man page
plot-methods Man page
plotI_Lines Source code
plotI_Points Source code
pvalue Man page
pvalue,highTtest Man page
pvalue,highTtest-method Man page
tStatistic Source code
venn2 Source code
venn3 Source code
vennD Man page
vennD,highTtest Man page
vennD,highTtest,numeric-method Man page
vennD-methods Man page

Files

NAMESPACE
R
R/methods-venn.R
R/methods-plot.R
R/StoreyTibshirani.R
R/methods-retrieve.R
R/highTtest.R
R/tStatistic.R
R/All_Classes.R
R/BenjaminiHochberg.R
R/CaoKosorok.R
MD5
DESCRIPTION
man
man/plot-methods.Rd
man/vennD-methods.Rd
man/highTtest.Rd
man/highTtest-class.Rd
highTtest documentation built on May 19, 2017, 8:14 a.m.