hwde: Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci

Fits models for genotypic disequilibria, as described in Huttley and Wilson (2000), Weir (1996) and Weir and Wilson (1986). Contrast terms are available that account for first order interactions between loci. Also implements, for a single locus in a single population, a conditional exact test for Hardy-Weinberg equilibrium.

Package details

AuthorJohn Maindonald, with \code{hwexact()} from Randall Johnson.
MaintainerJohn Maindonald <John.Maindonald@anu.edu.au>
LicenseGPL (>= 2)
URL http://maths-people.anu.edu.au/~johnm
Package repositoryView on CRAN
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hwde documentation built on May 2, 2019, 8:53 a.m.