| lc50_probit | R Documentation |
Estimates the lethal concentration by maximum-likelihood probit analysis in the sense of Finney: a binomial generalized linear model with probit link fitted by iteratively reweighted least squares.
lc50_probit(d, lc = 0.5)
d |
Same as |
lc |
Same as |
Unlike the two regression methods, the line is fitted by
maximum likelihood (a quasibinomial GLM with probit link, fitted by
iteratively reweighted least squares) to the Abbott-corrected
proportions p = (p_raw - p_c) / (1 - p_c) with the numbers
tested as weights (the classic Finney effective-counts
formulation), rather than by least squares to probit-transformed
points. Groups with a corrected mortality of exactly 0
are dropped, as in the two regression methods. A quasibinomial
family is used, so the covariance matrix of the coefficients
incorporates the heterogeneity factor (Pearson chi-square divided
by the residual degrees of freedom): the confidence intervals are
automatically widened when the data show more variation than the
binomial assumption allows. The reported chi-square statistic and
its p value serve as a goodness-of-fit test of the probit-log
concentration line.
Same as lc50_traditional (with fit being
the fitted glm object).
Finney, D. J. (1971) Probit Analysis, 3rd edition. Cambridge University Press, Cambridge.
lc50_traditional, lc50_improved
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