Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory

calculatePermutedScoreByGeneSampling | Calculate the permuted latent trait by gene sampling |

computeAbility | Calculate latent traits for a given response matrix and item... |

datasets | Ovarian Cancer Datasets |

dichotomize | A wrapper that is able to dichotomize expression, methylation... |

dichotomizeCN | Dichotomizing copy number data based on segmented data (i.e.... |

dichotomizeExpr | Dichotomize the expression data given both tumor and normal... |

dichotomizeMethy | Dichotomize the methylation data given both tumor and normal... |

fitOnSinglePlat | Fit IRT model on a single platform |

intIRTeasyRun | The easyrun function for integrating multiple modalities of... |

intIRTeasyRunFromRaw | The easyrun function for integrating multiple modalities of... |

simulateBinaryResponseMat | Simulate binary response matrix according to 2-parameter Item... |

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